Analysis of interatomic Contacts of Structural Units in PDB entry:
8P2I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8P2I entry

There are 13 chains in PDB entry 8P2I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1GLY 901
B
ASP 8ARG 1116
C
VAL 1GLN 390
D
GLY 3THR 260
E
MET 1LYS 189
F
ILE 2LYS 117
H
PHE 7GLU 81
K
LYS 3PRO 56
L
MET 1LYS 94
N
MET 1TYR 65
P
VAL 2ILE 49
G
LYS 4GLU 84
I
GLU 3VAL 60
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are136 helices in PDB entry 8P2I. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
14 22Right-handed alpha
Helix 2
AA2
A
45 49Right-handed 310
Helix 3
AA3
A
85 94Right-handed alpha
Helix 4
AA4
A
106 119Right-handed alpha
Helix 5
AA5
A
123 140Right-handed alpha
Helix 6
AA6
A
168 172Right-handed 310
Helix 7
AA7
A
179 189Right-handed alpha
Helix 8
AA8
A
191 199Right-handed 310
Helix 9
AA9
A
206 209Right-handed 310
Helix 10
AB1
A
219 223Right-handed 310
Helix 11
AB2
A
236 258Right-handed alpha
Helix 12
AB3
A
261 281Right-handed alpha
Helix 13
AB4
A
300 305Right-handed alpha
Helix 14
AB5
A
310 315Right-handed alpha
Helix 15
AB6
A
344 348Right-handed alpha
Helix 16
AB7
A
360 371Right-handed alpha
Helix 17
AB8
A
395 403Right-handed alpha
Helix 18
AB9
A
428 430Right-handed 310
Helix 19
AC1
A
451 456Right-handed alpha
Helix 20
AC2
A
471 482Right-handed alpha
Helix 21
AC3
A
483 488Right-handed 310
Helix 22
AC4
A
502 513Right-handed alpha
Helix 23
AC5
A
519 531Right-handed alpha
Helix 24
AC6
A
553 559Right-handed alpha
Helix 25
AC7
A
576 590Right-handed alpha
Helix 26
AC8
A
594 599Right-handed alpha
Helix 27
AC9
A
620 625Right-handed alpha
Helix 28
AD1
A
630 663Right-handed alpha
Helix 29
AD2
A
667 672Right-handed 310
Helix 30
AD3
A
674 701Right-handed alpha
Helix 31
AD4
A
711 739Right-handed alpha
Helix 32
AD5
A
743 751Right-handed alpha
Helix 33
AD6
A
756 765Right-handed alpha
Helix 34
AD7
A
796 799Right-handed 310
Helix 35
AD8
A
811 848Right-handed alpha
Helix 36
AD9
A
869 873Right-handed 310
Helix 37
AE1
A
887 901Right-handed alpha
Helix 38
AE2
B
10 26Right-handed alpha
Helix 39
AE3
B
28 51Right-handed alpha
Helix 40
AE4
B
85 93Right-handed alpha
Helix 41
AE5
B
138 145Right-handed alpha
Helix 42
AE6
B
225 232Right-handed alpha
Helix 43
AE7
B
236 245Right-handed alpha
Helix 44
AE8
B
247 261Right-handed alpha
Helix 45
AE9
B
266 279Right-handed alpha
Helix 46
AF1
B
283 299Right-handed alpha
Helix 47
AF2
B
300 304Right-handed 310
Helix 48
AF3
B
306 308Right-handed 310
Helix 49
AF4
B
309 329Right-handed alpha
Helix 50
AF5
B
339 341Right-handed 310
Helix 51
AF6
B
347 379Right-handed alpha
Helix 52
AF7
B
380 386Right-handed alpha
Helix 53
AF8
B
386 393Right-handed alpha
Helix 54
AF9
B
396 411Right-handed alpha
Helix 55
AG1
B
428 436Right-handed alpha
Helix 56
AG2
B
449 454Right-handed alpha
Helix 57
AG3
B
456 460Right-handed 310
Helix 58
AG4
B
491 502Right-handed alpha
Helix 59
AG5
B
531 546Right-handed alpha
Helix 60
AG6
B
587 596Right-handed alpha
Helix 61
AG7
B
600 607Right-handed alpha
Helix 62
AG8
B
614 619Right-handed alpha
Helix 63
AG9
B
626 630Right-handed 310
Helix 64
AH1
B
640 645Right-handed 310
Helix 65
AH2
B
647 652Right-handed 310
Helix 66
AH3
B
654 658Right-handed 310
Helix 67
AH4
B
659 670Right-handed alpha
Helix 68
AH5
B
680 684Right-handed 310
Helix 69
AH6
B
702 708Right-handed alpha
Helix 70
AH7
B
709 713Right-handed 310
Helix 71
AH8
B
727 731Right-handed 310
Helix 72
AH9
B
739 744Right-handed alpha
Helix 73
AI1
B
762 766Right-handed 310
Helix 74
AI2
B
782 787Right-handed 310
Helix 75
AI3
B
891 895Right-handed 310
Helix 76
AI4
B
911 917Right-handed alpha
Helix 77
AI5
B
918 935Right-handed alpha
Helix 78
AI6
B
947 958Right-handed alpha
Helix 79
AI7
B
994 998Right-handed 310
Helix 80
AI8
B
1027 1038Right-handed alpha
Helix 81
AI9
B
1039 1048Right-handed alpha
Helix 82
AJ1
B
1092 1105Right-handed alpha
Helix 83
AJ2
C
2 14Right-handed alpha
Helix 84
AJ3
C
18 36Right-handed alpha
Helix 85
AJ4
C
39 57Right-handed alpha
Helix 86
AJ5
C
64 75Right-handed alpha
Helix 87
AJ6
C
76 79Right-handed 310
Helix 88
AJ7
C
97 108Right-handed alpha
Helix 89
AJ8
C
128 140Right-handed alpha
Helix 90
AJ9
C
144 147Right-handed alpha
Helix 91
AK1
C
165 171Right-handed alpha
Helix 92
AK2
C
175 187Right-handed alpha
Helix 93
AK3
C
203 208Right-handed alpha
Helix 94
AK4
C
212 221Right-handed alpha
Helix 95
AK5
C
250 255Right-handed alpha
Helix 96
AK6
C
269 278Right-handed alpha
Helix 97
AK7
C
278 297Right-handed alpha
Helix 98
AK8
C
302 314Right-handed alpha
Helix 99
AK9
C
327 331Right-handed 310
Helix 100
AL1
C
333 339Right-handed alpha
Helix 101
AL2
C
342 354Right-handed alpha
Helix 102
AL3
C
362 369Right-handed alpha
Helix 103
AL4
C
374 379Right-handed 310
Helix 104
AL5
D
24 38Right-handed alpha
Helix 105
AL6
D
57 68Right-handed alpha
Helix 106
AL7
D
104 106Right-handed 310
Helix 107
AL8
D
145 149Right-handed 310
Helix 108
AL9
D
169 181Right-handed alpha
Helix 109
AM1
D
205 209Right-handed 310
Helix 110
AM2
D
233 258Right-handed alpha
Helix 111
AM3
E
14 18Right-handed 310
Helix 112
AM4
E
21 34Right-handed alpha
Helix 113
AM5
E
111 113Right-handed 310
Helix 114
AM6
E
173 189Right-handed alpha
Helix 115
AM7
F
13 31Right-handed alpha
Helix 116
AM8
F
41 51Right-handed alpha
Helix 117
AM9
F
55 70Right-handed alpha
Helix 118
AN1
F
74 85Right-handed alpha
Helix 119
AN2
F
88 98Right-handed alpha
Helix 120
AN3
F
104 116Right-handed alpha
Helix 121
AN4
H
8 12Right-handed 310
Helix 122
AN5
H
22 33Right-handed alpha
Helix 123
AN6
H
36 40Right-handed 310
Helix 124
AN7
H
47 54Right-handed alpha
Helix 125
AN8
K
5 23Right-handed alpha
Helix 126
AN9
K
35 46Right-handed alpha
Helix 127
AO1
L
21 33Right-handed alpha
Helix 128
AO2
L
66 94Right-handed alpha
Helix 129
AO3
N
17 28Right-handed alpha
Helix 130
AO4
N
30 39Right-handed alpha
Helix 131
AO5
N
42 52Right-handed alpha
Helix 132
AO6
G
14 30Right-handed alpha
Helix 133
AO7
G
52 61Right-handed alpha
Helix 134
AO8
G
75 78Right-handed 310
Helix 135
AO9
G
79 84Right-handed alpha
Helix 136
AP1
I
42 49Right-handed alpha
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There are 43 sheets in PDB entry 8P2I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1110 1114first strand
Strand 2
A
4 9anti-parallel
Strand 3
C
356 357anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
72 81first strand
Strand 2
A
211 217anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 157first strand
Strand 2
A
161 164anti-parallel
Strand 3
A
176 177anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
226 227first strand
Strand 2
A
233 234anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
319 320first strand
Strand 2
B
1025 1026anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1000 1002first strand
Strand 2
A
324 331anti-parallel
Strand 3
A
463 467anti-parallel
Strand 4
A
418 422anti-parallel
Strand 5
A
432 440anti-parallel
Strand 6
A
339 343parallel
Strand 7
A
445 447anti-parallel
Strand 8
A
324 331parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
351 355first strand
Strand 2
A
408 412anti-parallel
Strand 3
A
378 382anti-parallel
Strand 4
A
388 390anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
517 518first strand
Strand 2
A
549 552anti-parallel
Strand 3
A
542 543anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
567 570first strand
Strand 2
A
606 610anti-parallel
Strand 3
A
613 616anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
768 769first strand
Strand 2
A
801 802anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
771 772first strand
Strand 2
A
775 776anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
851 852first strand
Strand 2
A
858 859anti-parallel
Strand 3
A
865 867anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
60 69first strand
Strand 2
B
97 108anti-parallel
Strand 3
B
111 112anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
60 69first strand
Strand 2
B
97 108anti-parallel
Strand 3
B
116 124anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
73 75first strand
Strand 2
B
81 83anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
156 158first strand
Strand 2
B
161 165anti-parallel
Strand 3
B
421 423anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
343 346first strand
Strand 2
B
167 171anti-parallel
Strand 3
B
439 440parallel
Strand 4
B
477 478anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
177 181first strand
Strand 2
B
186 195anti-parallel
Strand 3
B
198 206anti-parallel
Strand 4
B
212 215anti-parallel
Strand 5
B
223 224anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
485 486first strand
Strand 2
B
572 580anti-parallel
Strand 3
B
610 613anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
583 584first strand
Strand 2
B
572 580anti-parallel
Strand 3
B
636 637anti-parallel
Strand 4
B
623 624parallel
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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
505 506first strand
Strand 2
B
524 529anti-parallel
Strand 3
B
517 521anti-parallel
Strand 4
B
562 566parallel
Strand 5
B
553 557anti-parallel
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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
688 692first strand
Strand 2
B
749 758anti-parallel
Strand 3
B
858 868anti-parallel
Strand 4
B
843 852anti-parallel
Strand 5
B
800 801anti-parallel
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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
688 692first strand
Strand 2
B
749 758anti-parallel
Strand 3
B
858 868anti-parallel
Strand 4
B
843 852anti-parallel
Strand 5
P
35 36anti-parallel
Strand 6
P
4 8anti-parallel
Strand 7
P
14 17anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
700 701first strand
Strand 2
B
938 939parallel
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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
965 966first strand
Strand 2
B
981 990anti-parallel
Strand 3
B
875 878anti-parallel
Strand 4
B
883 890anti-parallel
Strand 5
B
735 738parallel
Strand 6
B
906 908anti-parallel
Strand 7
B
717 723parallel
Strand 8
B
981 990anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
769 770first strand
Strand 2
B
810 812anti-parallel
Strand 3
B
831 832anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
806 808first strand
Strand 2
B
835 836anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
897 898first strand
Strand 2
B
968 969anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1054 1059first strand
Strand 2
B
1086 1091anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1067 1069first strand
Strand 2
B
1074 1076anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
233 238first strand
Strand 2
C
241 247anti-parallel
Strand 3
C
116 120anti-parallel
Strand 4
C
266 267anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
142 143first strand
Strand 2
C
223 225anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
148 154first strand
Strand 2
C
159 164anti-parallel
Strand 3
C
198 201anti-parallel
Strand 4
C
193 195anti-parallel
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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
37 39first strand
Strand 2
E
43 59anti-parallel
Strand 3
E
66 77anti-parallel
Strand 4
E
2 13anti-parallel
Strand 5
F
10 11anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
37 39first strand
Strand 2
E
43 59anti-parallel
Strand 3
C
380 383anti-parallel
Strand 4
K
51 54anti-parallel
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There are 6 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
5 11first strand
Strand 2
D
15 21anti-parallel
Strand 3
D
213 228anti-parallel
Strand 4
D
151 164anti-parallel
Strand 5
D
190 194anti-parallel
Strand 6
D
184 186anti-parallel
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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
107 108first strand
Strand 2
D
88 96anti-parallel
Strand 3
D
130 140anti-parallel
Strand 4
D
41 52anti-parallel
Strand 5
P
44 47anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
99 102first strand
Strand 2
D
121 125anti-parallel
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There are 7 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
171 172first strand
Strand 2
E
141 149anti-parallel
Strand 3
E
161 164anti-parallel
Strand 4
E
105 109parallel
Strand 5
E
96 100anti-parallel
Strand 6
E
85 93anti-parallel
Strand 7
E
141 149anti-parallel
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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
17 20first strand
Strand 2
H
60 65anti-parallel
Strand 3
H
73 80anti-parallel
Strand 4
H
42 44parallel
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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
2 8first strand
Strand 2
L
12 18anti-parallel
Strand 3
L
56 61anti-parallel
Strand 4
L
38 44anti-parallel
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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
66 69first strand
Strand 2
G
5 10anti-parallel
Strand 3
G
45 49anti-parallel
Strand 4
G
35 37anti-parallel
Strand 5
I
34 36anti-parallel
Strand 6
I
54 56anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
4 5first strand
Strand 2
I
12 13anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il