Analysis of interatomic Contacts of Structural Units in PDB entry:
8P37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8P37 entry

There is 1 chain in PDB entry 8P37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2GLY 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8P37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 18Right-handed 310
Helix 2
AA2
A
30 34Right-handed 310
Helix 3
AA3
A
59 70Right-handed alpha
Helix 4
AA4
A
79 84Right-handed alpha
Helix 5
AA5
A
87 97Right-handed alpha
Helix 6
AA6
A
101 110Right-handed alpha
Helix 7
AA7
A
115 129Right-handed alpha
Helix 8
AA8
A
138 153Right-handed alpha
Helix 9
AA9
A
178 186Right-handed alpha
Helix 10
AB1
A
197 208Right-handed alpha
Helix 11
AB2
A
223 229Right-handed alpha
Helix 12
AB3
A
233 253Right-handed alpha
Helix 13
AB4
A
266 276Right-handed alpha
Helix 14
AB5
A
284 289Right-handed alpha
Helix 15
AB6
A
322 329Right-handed alpha
Helix 16
AB7
A
339 352Right-handed alpha
Helix 17
AB8
A
355 360Right-handed alpha
Helix 18
AB9
A
375 382Right-handed alpha
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There are 5 sheets in PDB entry 8P37. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
9 11anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
363 366anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
43 45anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
72 76parallel
Strand 3
A
134 137parallel
Strand 4
A
156 160parallel
Strand 5
A
190 195parallel
Strand 6
A
211 214parallel
Strand 7
A
258 261parallel
Strand 8
A
280 283parallel
Strand 9
A
49 51parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 300first strand
Strand 2
A
314 316anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il