Analysis of interatomic Contacts of Structural Units in PDB entry:
8P3M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8P3M entry

There are 16 chains in PDB entry 8P3M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 82THR 548
D
 LYS 82THR 548
G
 LYS 82THR 548
J
 LYS 82THR 548
M
 LYS 82THR 548
P
 LYS 82THR 548
S
 LYS 82THR 548
V
 LYS 82THR 548
Y
 LYS 82THR 548
2
 LYS 82THR 548
5
 LYS 82THR 548
8
 LYS 82THR 548
x
 LYS 82THR 548
e
 LYS 82THR 548
h
 LYS 82THR 548
k
 LYS 82THR 548
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are175 helices in PDB entry 8P3M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 94Right-handed alpha
Helix 2
AA2
A
103 105Right-handed 310
Helix 3
AA3
A
125 128Right-handed 310
Helix 4
AA4
A
158 163Right-handed 310
Helix 5
AA5
A
195 200Right-handed alpha
Helix 6
AA6
A
250 254Right-handed 310
Helix 7
AA7
A
270 274Right-handed 310
Helix 8
AA8
A
293 299Right-handed alpha
Helix 9
AA9
A
306 310Right-handed 310
Helix 10
AB1
A
413 417Right-handed 310
Helix 11
AB2
A
500 502Right-handed 310
Helix 12
AB3
A
537 543Right-handed 310
Helix 13
AB4
D
86 94Right-handed alpha
Helix 14
AB5
D
103 105Right-handed 310
Helix 15
AB6
D
125 128Right-handed 310
Helix 16
AB7
D
158 164Right-handed 310
Helix 17
AB8
D
195 200Right-handed alpha
Helix 18
AB9
D
292 299Right-handed alpha
Helix 19
AC1
D
306 310Right-handed 310
Helix 20
AC2
D
413 417Right-handed 310
Helix 21
AC3
D
500 502Right-handed 310
Helix 22
AC4
D
538 543Right-handed 310
Helix 23
AC5
G
86 94Right-handed alpha
Helix 24
AC6
G
103 105Right-handed 310
Helix 25
AC7
G
125 128Right-handed 310
Helix 26
AC8
G
158 163Right-handed 310
Helix 27
AC9
G
195 200Right-handed alpha
Helix 28
AD1
G
250 254Right-handed 310
Helix 29
AD2
G
292 299Right-handed alpha
Helix 30
AD3
G
306 310Right-handed 310
Helix 31
AD4
G
413 417Right-handed 310
Helix 32
AD5
G
500 502Right-handed 310
Helix 33
AD6
G
538 543Right-handed 310
Helix 34
AD7
J
86 94Right-handed alpha
Helix 35
AD8
J
103 105Right-handed 310
Helix 36
AD9
J
125 128Right-handed 310
Helix 37
AE1
J
158 163Right-handed 310
Helix 38
AE2
J
195 200Right-handed alpha
Helix 39
AE3
J
292 299Right-handed alpha
Helix 40
AE4
J
306 310Right-handed 310
Helix 41
AE5
J
413 417Right-handed 310
Helix 42
AE6
J
500 502Right-handed 310
Helix 43
AE7
J
536 543Right-handed 310
Helix 44
AE8
M
85 94Right-handed alpha
Helix 45
AE9
M
103 105Right-handed 310
Helix 46
AF1
M
125 128Right-handed 310
Helix 47
AF2
M
158 163Right-handed 310
Helix 48
AF3
M
195 200Right-handed alpha
Helix 49
AF4
M
293 299Right-handed alpha
Helix 50
AF5
M
306 310Right-handed 310
Helix 51
AF6
M
413 417Right-handed 310
Helix 52
AF7
M
500 502Right-handed 310
Helix 53
AF8
M
537 543Right-handed 310
Helix 54
AF9
P
86 94Right-handed alpha
Helix 55
AG1
P
103 105Right-handed 310
Helix 56
AG2
P
125 128Right-handed 310
Helix 57
AG3
P
158 163Right-handed 310
Helix 58
AG4
P
195 200Right-handed alpha
Helix 59
AG5
P
292 299Right-handed alpha
Helix 60
AG6
P
306 310Right-handed 310
Helix 61
AG7
P
413 417Right-handed 310
Helix 62
AG8
P
500 502Right-handed 310
Helix 63
AG9
P
538 543Right-handed 310
Helix 64
AH1
S
86 94Right-handed alpha
Helix 65
AH2
S
103 105Right-handed 310
Helix 66
AH3
S
125 128Right-handed 310
Helix 67
AH4
S
158 163Right-handed 310
Helix 68
AH5
S
195 200Right-handed alpha
Helix 69
AH6
S
293 299Right-handed alpha
Helix 70
AH7
S
306 310Right-handed 310
Helix 71
AH8
S
413 417Right-handed 310
Helix 72
AH9
S
500 502Right-handed 310
Helix 73
AI1
S
537 543Right-handed 310
Helix 74
AI2
V
86 92Right-handed alpha
Helix 75
AI3
V
103 105Right-handed 310
Helix 76
AI4
V
125 128Right-handed 310
Helix 77
AI5
V
158 163Right-handed 310
Helix 78
AI6
V
195 200Right-handed alpha
Helix 79
AI7
V
292 299Right-handed alpha
Helix 80
AI8
V
306 310Right-handed 310
Helix 81
AI9
V
413 417Right-handed 310
Helix 82
AJ1
V
500 502Right-handed 310
Helix 83
AJ2
V
538 543Right-handed 310
Helix 84
AJ3
Y
86 94Right-handed alpha
Helix 85
AJ4
Y
103 105Right-handed 310
Helix 86
AJ5
Y
125 128Right-handed 310
Helix 87
AJ6
Y
158 163Right-handed 310
Helix 88
AJ7
Y
195 200Right-handed alpha
Helix 89
AJ8
Y
250 254Right-handed 310
Helix 90
AJ9
Y
292 299Right-handed alpha
Helix 91
AK1
Y
306 310Right-handed 310
Helix 92
AK2
Y
413 417Right-handed 310
Helix 93
AK3
Y
425 429Right-handed 310
Helix 94
AK4
Y
500 502Right-handed 310
Helix 95
AK5
Y
538 543Right-handed 310
Helix 96
AK6
2
85 94Right-handed alpha
Helix 97
AK7
2
103 105Right-handed 310
Helix 98
AK8
2
125 128Right-handed 310
Helix 99
AK9
2
158 163Right-handed 310
Helix 100
AL1
2
195 200Right-handed alpha
Helix 101
AL2
2
250 254Right-handed 310
Helix 102
AL3
2
270 274Right-handed 310
Helix 103
AL4
2
293 299Right-handed alpha
Helix 104
AL5
2
306 310Right-handed 310
Helix 105
AL6
2
413 417Right-handed 310
Helix 106
AL7
2
500 502Right-handed 310
Helix 107
AL8
2
536 541Right-handed alpha
Helix 108
AL9
5
86 94Right-handed alpha
Helix 109
AM1
5
103 105Right-handed 310
Helix 110
AM2
5
125 128Right-handed 310
Helix 111
AM3
5
158 163Right-handed 310
Helix 112
AM4
5
195 200Right-handed alpha
Helix 113
AM5
5
250 254Right-handed 310
Helix 114
AM6
5
292 299Right-handed alpha
Helix 115
AM7
5
306 310Right-handed 310
Helix 116
AM8
5
413 417Right-handed 310
Helix 117
AM9
5
425 429Right-handed 310
Helix 118
AN1
5
500 502Right-handed 310
Helix 119
AN2
5
536 541Right-handed alpha
Helix 120
AN3
8
86 94Right-handed alpha
Helix 121
AN4
8
103 105Right-handed 310
Helix 122
AN5
8
125 128Right-handed 310
Helix 123
AN6
8
158 163Right-handed 310
Helix 124
AN7
8
195 200Right-handed alpha
Helix 125
AN8
8
250 254Right-handed 310
Helix 126
AN9
8
292 299Right-handed alpha
Helix 127
AO1
8
306 310Right-handed 310
Helix 128
AO2
8
413 417Right-handed 310
Helix 129
AO3
8
500 502Right-handed 310
Helix 130
AO4
8
536 541Right-handed alpha
Helix 131
AO5
x
86 92Right-handed alpha
Helix 132
AO6
x
103 105Right-handed 310
Helix 133
AO7
x
125 128Right-handed 310
Helix 134
AO8
x
158 163Right-handed 310
Helix 135
AO9
x
195 200Right-handed alpha
Helix 136
AP1
x
250 254Right-handed 310
Helix 137
AP2
x
292 299Right-handed alpha
Helix 138
AP3
x
306 310Right-handed 310
Helix 139
AP4
x
500 502Right-handed 310
Helix 140
AP5
x
536 541Right-handed alpha
Helix 141
AP6
e
86 92Right-handed alpha
Helix 142
AP7
e
103 105Right-handed 310
Helix 143
AP8
e
125 128Right-handed 310
Helix 144
AP9
e
158 163Right-handed 310
Helix 145
AQ1
e
195 200Right-handed alpha
Helix 146
AQ2
e
250 254Right-handed 310
Helix 147
AQ3
e
270 274Right-handed 310
Helix 148
AQ4
e
292 299Right-handed alpha
Helix 149
AQ5
e
306 310Right-handed 310
Helix 150
AQ6
e
413 417Right-handed 310
Helix 151
AQ7
e
425 429Right-handed 310
Helix 152
AQ8
e
500 502Right-handed 310
Helix 153
AQ9
e
538 543Right-handed 310
Helix 154
AR1
h
86 94Right-handed alpha
Helix 155
AR2
h
103 105Right-handed 310
Helix 156
AR3
h
125 128Right-handed 310
Helix 157
AR4
h
158 163Right-handed 310
Helix 158
AR5
h
195 200Right-handed alpha
Helix 159
AR6
h
292 299Right-handed alpha
Helix 160
AR7
h
306 310Right-handed 310
Helix 161
AR8
h
413 417Right-handed 310
Helix 162
AR9
h
500 502Right-handed 310
Helix 163
AS1
h
536 541Right-handed alpha
Helix 164
AS2
k
86 92Right-handed alpha
Helix 165
AS3
k
103 105Right-handed 310
Helix 166
AS4
k
125 128Right-handed 310
Helix 167
AS5
k
158 163Right-handed 310
Helix 168
AS6
k
195 200Right-handed alpha
Helix 169
AS7
k
250 254Right-handed 310
Helix 170
AS8
k
270 274Right-handed 310
Helix 171
AS9
k
292 299Right-handed alpha
Helix 172
AT1
k
306 310Right-handed 310
Helix 173
AT2
k
413 417Right-handed 310
Helix 174
AT3
k
500 502Right-handed 310
Helix 175
AT4
k
536 541Right-handed alpha
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