Analysis of interatomic Contacts of Structural Units in PDB entry:
8P6A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8P6A entry

There is 1 chain in PDB entry 8P6A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 34HIS 559
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8P6A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 62Right-handed alpha
Helix 2
AA2
A
70 96Right-handed alpha
Helix 3
AA3
A
103 118Right-handed alpha
Helix 4
AA4
A
157 182Right-handed alpha
Helix 5
AA5
A
183 186Right-handed 310
Helix 6
AA6
A
187 220Right-handed alpha
Helix 7
AA7
A
221 225Right-handed 310
Helix 8
AA8
A
226 244Right-handed alpha
Helix 9
AA9
A
311 346Right-handed alpha
Helix 10
AB1
A
347 349Right-handed 310
Helix 11
AB2
A
367 370Right-handed 310
Helix 12
AB3
A
371 396Right-handed alpha
Helix 13
AB4
A
400 433Right-handed alpha
Helix 14
AB5
A
450 453Right-handed 310
Helix 15
AB6
A
454 479Right-handed alpha
Helix 16
AB7
A
484 511Right-handed alpha
Helix 17
AB8
A
532 559Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8P6A.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 436first strand
Strand 2
A
445 446anti-parallel
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