Analysis of interatomic Contacts of Structural Units in PDB entry:
8P6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8P6H entry

There are 2 chains in PDB entry 8P6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 GLN 1CYS 215
H
 VAL 2CYS 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8P6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
28 32Right-handed 310
Helix 2
AA2
L
80 84Right-handed 310
Helix 3
AA3
L
125 131Right-handed alpha
Helix 4
AA4
L
186 192Right-handed alpha
Helix 5
AA5
H
63 65Right-handed 310
Helix 6
AA6
H
86 90Right-handed 310
Helix 7
AA7
H
207 209Right-handed 310
Helix 8
AA8
H
252 255Right-handed 310
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There are 12 sheets in PDB entry 8P6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 13first strand
Strand 2
L
105 110parallel
Strand 3
L
85 92anti-parallel
Strand 4
L
35 39anti-parallel
Strand 5
L
46 50anti-parallel
Strand 6
L
54 55anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 13first strand
Strand 2
L
105 110parallel
Strand 3
L
85 92anti-parallel
Strand 4
L
99 101anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
18 23first strand
Strand 2
L
71 76anti-parallel
Strand 3
L
63 68anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
118 122first strand
Strand 2
L
133 143anti-parallel
Strand 3
L
176 185anti-parallel
Strand 4
L
163 165anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
118 122first strand
Strand 2
L
133 143anti-parallel
Strand 3
L
176 185anti-parallel
Strand 4
L
169 170anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
157 159first strand
Strand 2
L
149 154anti-parallel
Strand 3
L
195 201anti-parallel
Strand 4
L
204 210anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
5 7first strand
Strand 2
H
18 23anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
67 72anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
158 162parallel
Strand 3
H
91 101anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
46 51anti-parallel
Strand 6
H
57 59anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
158 162parallel
Strand 3
H
91 101anti-parallel
Strand 4
H
148 154anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
171 176first strand
Strand 2
H
187 196anti-parallel
Strand 3
H
227 235anti-parallel
Strand 4
H
214 216anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
171 176first strand
Strand 2
H
187 196anti-parallel
Strand 3
H
227 235anti-parallel
Strand 4
H
220 221anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
202 205first strand
Strand 2
H
246 251anti-parallel
Strand 3
H
256 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il