Analysis of interatomic Contacts of Structural Units in PDB entry:
8P7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8P7N entry

There are 4 chains in PDB entry 8P7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 35LEU 362
B
 ARG 36LEU 362
C
 ARG 36LEU 362
D
 ARG 36THR 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 91 helices in PDB entry 8P7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 49Right-handed 310
Helix 2
AA2
A
64 69Right-handed alpha
Helix 3
AA3
A
70 74Right-handed 310
Helix 4
AA4
A
75 93Right-handed alpha
Helix 5
AA5
A
103 107Right-handed 310
Helix 6
AA6
A
109 121Right-handed alpha
Helix 7
AA7
A
135 140Right-handed alpha
Helix 8
AA8
A
142 155Right-handed alpha
Helix 9
AA9
A
177 195Right-handed alpha
Helix 10
AB1
A
203 206Right-handed 310
Helix 11
AB2
A
207 218Right-handed alpha
Helix 12
AB3
A
222 224Right-handed 310
Helix 13
AB4
A
230 234Right-handed 310
Helix 14
AB5
A
236 246Right-handed alpha
Helix 15
AB6
A
265 273Right-handed alpha
Helix 16
AB7
A
276 290Right-handed alpha
Helix 17
AB8
A
292 294Right-handed 310
Helix 18
AB9
A
312 321Right-handed alpha
Helix 19
AC1
A
323 325Right-handed 310
Helix 20
AC2
A
326 331Right-handed alpha
Helix 21
AC3
A
331 339Right-handed alpha
Helix 22
AC4
A
342 351Right-handed alpha
Helix 23
AC5
A
351 359Right-handed alpha
Helix 24
AC6
B
45 49Right-handed 310
Helix 25
AC7
B
64 69Right-handed alpha
Helix 26
AC8
B
70 74Right-handed 310
Helix 27
AC9
B
75 93Right-handed alpha
Helix 28
AD1
B
103 107Right-handed 310
Helix 29
AD2
B
109 121Right-handed alpha
Helix 30
AD3
B
135 140Right-handed alpha
Helix 31
AD4
B
142 156Right-handed alpha
Helix 32
AD5
B
158 162Right-handed 310
Helix 33
AD6
B
177 195Right-handed alpha
Helix 34
AD7
B
203 206Right-handed 310
Helix 35
AD8
B
207 218Right-handed alpha
Helix 36
AD9
B
222 224Right-handed 310
Helix 37
AE1
B
230 234Right-handed 310
Helix 38
AE2
B
236 247Right-handed alpha
Helix 39
AE3
B
265 273Right-handed alpha
Helix 40
AE4
B
276 290Right-handed alpha
Helix 41
AE5
B
292 294Right-handed 310
Helix 42
AE6
B
312 321Right-handed alpha
Helix 43
AE7
B
323 325Right-handed 310
Helix 44
AE8
B
326 338Right-handed alpha
Helix 45
AE9
B
342 351Right-handed alpha
Helix 46
AF1
B
351 359Right-handed alpha
Helix 47
AF2
C
64 69Right-handed alpha
Helix 48
AF3
C
70 74Right-handed 310
Helix 49
AF4
C
75 93Right-handed alpha
Helix 50
AF5
C
103 107Right-handed 310
Helix 51
AF6
C
109 121Right-handed alpha
Helix 52
AF7
C
135 140Right-handed alpha
Helix 53
AF8
C
142 156Right-handed alpha
Helix 54
AF9
C
158 162Right-handed 310
Helix 55
AG1
C
177 195Right-handed alpha
Helix 56
AG2
C
203 206Right-handed 310
Helix 57
AG3
C
207 219Right-handed alpha
Helix 58
AG4
C
222 224Right-handed 310
Helix 59
AG5
C
230 234Right-handed 310
Helix 60
AG6
C
236 246Right-handed alpha
Helix 61
AG7
C
265 273Right-handed alpha
Helix 62
AG8
C
276 289Right-handed alpha
Helix 63
AG9
C
292 294Right-handed 310
Helix 64
AH1
C
312 321Right-handed alpha
Helix 65
AH2
C
323 325Right-handed 310
Helix 66
AH3
C
326 331Right-handed alpha
Helix 67
AH4
C
331 339Right-handed alpha
Helix 68
AH5
C
342 351Right-handed alpha
Helix 69
AH6
C
351 359Right-handed alpha
Helix 70
AH7
D
64 69Right-handed alpha
Helix 71
AH8
D
70 74Right-handed 310
Helix 72
AH9
D
75 94Right-handed alpha
Helix 73
AI1
D
103 107Right-handed 310
Helix 74
AI2
D
109 121Right-handed alpha
Helix 75
AI3
D
135 140Right-handed alpha
Helix 76
AI4
D
142 156Right-handed alpha
Helix 77
AI5
D
158 162Right-handed 310
Helix 78
AI6
D
177 195Right-handed alpha
Helix 79
AI7
D
203 206Right-handed 310
Helix 80
AI8
D
207 220Right-handed alpha
Helix 81
AI9
D
222 224Right-handed 310
Helix 82
AJ1
D
230 234Right-handed 310
Helix 83
AJ2
D
236 246Right-handed alpha
Helix 84
AJ3
D
265 273Right-handed alpha
Helix 85
AJ4
D
276 290Right-handed alpha
Helix 86
AJ5
D
292 294Right-handed 310
Helix 87
AJ6
D
312 321Right-handed alpha
Helix 88
AJ7
D
323 325Right-handed 310
Helix 89
AJ8
D
326 338Right-handed alpha
Helix 90
AJ9
D
342 351Right-handed alpha
Helix 91
AK1
D
351 359Right-handed alpha
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There are 13 sheets in PDB entry 8P7N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
42 45anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 56first strand
Strand 2
A
97 100parallel
Strand 3
A
123 125parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 130first strand
Strand 2
A
167 171parallel
Strand 3
A
198 201parallel
Strand 4
A
226 228parallel
Strand 5
A
249 252parallel
Strand 6
A
296 298parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 39first strand
Strand 2
B
42 44anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 56first strand
Strand 2
B
97 100parallel
Strand 3
B
123 129parallel
Strand 4
B
167 171parallel
Strand 5
B
198 201parallel
Strand 6
B
226 228parallel
Strand 7
B
249 252parallel
Strand 8
B
296 298parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 60first strand
Strand 2
B
305 306parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 39first strand
Strand 2
C
42 44anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 56first strand
Strand 2
C
97 100parallel
Strand 3
C
123 125parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 60first strand
Strand 2
C
305 306parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
127 129first strand
Strand 2
C
167 171parallel
Strand 3
C
198 201parallel
Strand 4
C
226 229parallel
Strand 5
C
249 252parallel
Strand 6
C
296 298parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 39first strand
Strand 2
D
42 44anti-parallel
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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 56first strand
Strand 2
D
97 100parallel
Strand 3
D
123 129parallel
Strand 4
D
165 171parallel
Strand 5
D
198 201parallel
Strand 6
D
226 228parallel
Strand 7
D
249 252parallel
Strand 8
D
296 298parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 60first strand
Strand 2
D
305 306parallel
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