Analysis of interatomic Contacts of Structural Units in PDB entry:
8PC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PC8 entry

There is 1 chain in PDB entry 8PC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 0HIS 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 8PC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
26 31Right-handed alpha
Helix 3
AA3
A
45 51Right-handed alpha
Helix 4
AA4
A
161 163Right-handed 310
Helix 5
AA5
A
205 208Right-handed 310
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There are 2 sheets in PDB entry 8PC8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 44first strand
Strand 2
A
33 36anti-parallel
Strand 3
A
76 81anti-parallel
Strand 4
A
214 222anti-parallel
Strand 5
A
117 124anti-parallel
Strand 6
A
129 141anti-parallel
Strand 7
A
144 155anti-parallel
Strand 8
A
165 172anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
65 71anti-parallel
Strand 3
A
230 242anti-parallel
Strand 4
A
100 107anti-parallel
Strand 5
A
178 185anti-parallel
Strand 6
A
188 193anti-parallel
Strand 7
A
196 203anti-parallel
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