Analysis of interatomic Contacts of Structural Units in PDB entry:
8PEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PEB entry

There is 1 chain in PDB entry 8PEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24PRO 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8PEB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 37Right-handed alpha
Helix 2
AA2
A
58 63Right-handed alpha
Helix 3
AA3
A
68 71Right-handed 310
Helix 4
AA4
A
72 83Right-handed alpha
Helix 5
AA5
A
102 106Right-handed 310
Helix 6
AA6
A
110 117Right-handed alpha
Helix 7
AA7
A
119 131Right-handed alpha
Helix 8
AA8
A
131 142Right-handed alpha
Helix 9
AA9
A
155 160Right-handed alpha
Helix 10
AB1
A
165 178Right-handed alpha
Helix 11
AB2
A
184 195Right-handed alpha
Helix 12
AB3
A
248 261Right-handed alpha
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There are 2 sheets in PDB entry 8PEB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
53 56parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
232 240anti-parallel
Strand 5
A
219 227anti-parallel
Strand 6
A
204 212anti-parallel
Strand 7
A
196 199anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
162 163anti-parallel
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