Analysis of interatomic Contacts of Structural Units in PDB entry:
8PEF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PEF entry

There are 2 chains in PDB entry 8PEF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1GLU 933
B
 GLY 14ASN 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8PEF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
809 818Right-handed alpha
Helix 2
AA2
A
819 828Right-handed alpha
Helix 3
AA3
A
843 852Right-handed alpha
Helix 4
AA4
A
853 864Right-handed alpha
Helix 5
AA5
A
877 885Right-handed alpha
Helix 6
AA6
A
887 899Right-handed alpha
Helix 7
AA7
A
900 905Right-handed 310
Helix 8
AA8
A
912 917Right-handed 310
Helix 9
AA9
A
919 930Right-handed alpha
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There are no sheets in PDB entry 8PEF
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