Analysis of interatomic Contacts of Structural Units in PDB entry:
8PFL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PFL entry

There is 1 chain in PDB entry 8PFL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 523ASP 944
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8PFL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
523 528Right-handed 310
Helix 2
AA2
A
533 545Right-handed alpha
Helix 3
AA3
A
550 564Right-handed alpha
Helix 4
AA4
A
577 589Right-handed alpha
Helix 5
AA5
A
598 612Right-handed alpha
Helix 6
AA6
A
624 633Right-handed alpha
Helix 7
AA7
A
642 649Right-handed alpha
Helix 8
AA8
A
649 660Right-handed alpha
Helix 9
AA9
A
669 674Right-handed 310
Helix 10
AB1
A
681 686Right-handed alpha
Helix 11
AB2
A
689 694Right-handed alpha
Helix 12
AB3
A
707 718Right-handed alpha
Helix 13
AB4
A
745 751Right-handed alpha
Helix 14
AB5
A
752 754Right-handed 310
Helix 15
AB6
A
773 786Right-handed alpha
Helix 16
AB7
A
799 812Right-handed alpha
Helix 17
AB8
A
844 853Right-handed alpha
Helix 18
AB9
A
869 881Right-handed alpha
Helix 19
AC1
A
885 905Right-handed alpha
Helix 20
AC2
A
908 918Right-handed alpha
Helix 21
AC3
A
919 926Right-handed alpha
Helix 22
AC4
A
927 929Right-handed 310
Helix 23
AC5
A
936 944Right-handed alpha
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There are 3 sheets in PDB entry 8PFL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
638 641parallel
Strand 3
A
591 595parallel
Strand 4
A
662 667parallel
Strand 5
A
699 703parallel
Strand 6
A
567 571parallel
Strand 7
A
724 728parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
735 741first strand
Strand 2
A
862 868parallel
Strand 3
A
835 839parallel
Strand 4
A
767 770parallel
Strand 5
A
817 820parallel
Strand 6
A
791 794parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 757first strand
Strand 2
A
760 762anti-parallel
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