Analysis of interatomic Contacts of Structural Units in PDB entry:
8PHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PHZ entry

There are 5 chains in PDB entry 8PHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 174MET 309
B
 ASP 174MET 309
C
 ASP 174MET 309
D
 ASP 174MET 309
E
 ASP 174MET 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8PHZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
205 220Right-handed alpha
Helix 2
AA2
A
222 235Right-handed alpha
Helix 3
AA3
A
238 246Right-handed alpha
Helix 4
AA4
A
269 280Right-handed alpha
Helix 5
AA5
B
205 220Right-handed alpha
Helix 6
AA6
B
222 235Right-handed alpha
Helix 7
AA7
B
238 246Right-handed alpha
Helix 8
AA8
B
269 280Right-handed alpha
Helix 9
AA9
C
205 220Right-handed alpha
Helix 10
AB1
C
222 235Right-handed alpha
Helix 11
AB2
C
238 246Right-handed alpha
Helix 12
AB3
C
269 280Right-handed alpha
Helix 13
AB4
D
205 220Right-handed alpha
Helix 14
AB5
D
222 235Right-handed alpha
Helix 15
AB6
D
238 246Right-handed alpha
Helix 16
AB7
D
269 280Right-handed alpha
Helix 17
AB8
E
205 220Right-handed alpha
Helix 18
AB9
E
222 235Right-handed alpha
Helix 19
AC1
E
238 246Right-handed alpha
Helix 20
AC2
E
269 280Right-handed alpha
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There are 10 sheets in PDB entry 8PHZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
190 191parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 286first strand
Strand 2
A
300 302parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 177first strand
Strand 2
B
190 191parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 286first strand
Strand 2
B
300 302parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
190 191parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
284 286first strand
Strand 2
C
300 302parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
176 177first strand
Strand 2
D
190 191parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
284 286first strand
Strand 2
D
300 302parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
176 177first strand
Strand 2
E
190 191parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
284 286first strand
Strand 2
E
300 302parallel
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