Analysis of interatomic Contacts of Structural Units in PDB entry:
8PI9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PI9 entry

There are 4 chains in PDB entry 8PI9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 A 301 T 321
F
 A 401 T 421
A
 SER 93ALA 276
B
 PRO 84ALA 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8PI9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 110Right-handed alpha
Helix 2
AA2
A
111 127Right-handed alpha
Helix 3
AA3
A
129 138Right-handed alpha
Helix 4
AA4
A
140 151Right-handed alpha
Helix 5
AA5
A
155 180Right-handed alpha
Helix 6
AA6
A
207 221Right-handed alpha
Helix 7
AA7
A
225 244Right-handed alpha
Helix 8
AA8
A
251 258Right-handed 310
Helix 9
AA9
A
260 273Right-handed alpha
Helix 10
AB1
B
85 91Right-handed alpha
Helix 11
AB2
B
93 109Right-handed alpha
Helix 12
AB3
B
111 126Right-handed alpha
Helix 13
AB4
B
129 138Right-handed alpha
Helix 14
AB5
B
140 150Right-handed alpha
Helix 15
AB6
B
155 179Right-handed alpha
Helix 16
AB7
B
207 221Right-handed alpha
Helix 17
AB8
B
225 244Right-handed alpha
Helix 18
AB9
B
247 258Right-handed 310
Helix 19
AC1
B
260 274Right-handed alpha
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There are no sheets in PDB entry 8PI9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il