Analysis of interatomic Contacts of Structural Units in PDB entry:
8PO1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PO1 entry

There is 1 chain in PDB entry 8PO1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 699ASP 987
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8PO1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
752 767Right-handed alpha
Helix 2
AA2
A
800 808Right-handed alpha
Helix 3
AA3
A
809 812Right-handed 310
Helix 4
AA4
A
813 834Right-handed alpha
Helix 5
AA5
A
842 844Right-handed 310
Helix 6
AA6
A
880 884Right-handed 310
Helix 7
AA7
A
885 892Right-handed alpha
Helix 8
AA8
A
895 912Right-handed alpha
Helix 9
AA9
A
922 924Right-handed 310
Helix 10
AB1
A
925 933Right-handed alpha
Helix 11
AB2
A
943 954Right-handed alpha
Helix 12
AB3
A
957 961Right-handed 310
Helix 13
AB4
A
963 976Right-handed alpha
Helix 14
AB5
A
977 982Right-handed alpha
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There are 2 sheets in PDB entry 8PO1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
705 706first strand
Strand 2
A
782 785parallel
Strand 3
A
789 794anti-parallel
Strand 4
A
740 747anti-parallel
Strand 5
A
724 731anti-parallel
Strand 6
A
712 719anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
846 850first strand
Strand 2
A
853 856anti-parallel
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