Analysis of interatomic Contacts of Structural Units in PDB entry:
8PO6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PO6 entry

There is 1 chain in PDB entry 8PO6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5ASP 758
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 8PO6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 15Right-handed alpha
Helix 2
AA2
A
16 19Right-handed 310
Helix 3
AA3
A
20 32Right-handed alpha
Helix 4
AA4
A
33 37Right-handed 310
Helix 5
AA5
A
39 68Right-handed alpha
Helix 6
AA6
A
77 81Right-handed 310
Helix 7
AA7
A
82 93Right-handed alpha
Helix 8
AA8
A
105 118Right-handed alpha
Helix 9
AA9
A
131 147Right-handed alpha
Helix 10
AB1
A
175 182Right-handed alpha
Helix 11
AB2
A
198 202Right-handed 310
Helix 12
AB3
A
203 217Right-handed alpha
Helix 13
AB4
A
218 220Right-handed 310
Helix 14
AB5
A
233 241Right-handed alpha
Helix 15
AB6
A
269 289Right-handed alpha
Helix 16
AB7
A
299 312Right-handed alpha
Helix 17
AB8
A
328 333Right-handed alpha
Helix 18
AB9
A
334 337Right-handed 310
Helix 19
AC1
A
349 354Right-handed alpha
Helix 20
AC2
A
389 398Right-handed alpha
Helix 21
AC3
A
399 401Right-handed 310
Helix 22
AC4
A
413 420Right-handed alpha
Helix 23
AC5
A
426 431Right-handed alpha
Helix 24
AC6
A
432 444Right-handed alpha
Helix 25
AC7
A
459 472Right-handed alpha
Helix 26
AC8
A
487 494Right-handed alpha
Helix 27
AC9
A
499 510Right-handed alpha
Helix 28
AD1
A
511 513Right-handed 310
Helix 29
AD2
A
514 525Right-handed alpha
Helix 30
AD3
A
537 546Right-handed alpha
Helix 31
AD4
A
547 549Right-handed 310
Helix 32
AD5
A
555 572Right-handed alpha
Helix 33
AD6
A
573 584Right-handed alpha
Helix 34
AD7
A
587 608Right-handed alpha
Helix 35
AD8
A
618 628Right-handed alpha
Helix 36
AD9
A
629 632Right-handed 310
Helix 37
AE1
A
688 696Right-handed 310
Helix 38
AE2
A
738 740Right-handed 310
Helix 39
AE3
A
741 750Right-handed alpha
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There are 6 sheets in PDB entry 8PO6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 157first strand
Strand 2
A
170 174parallel
Strand 3
A
124 129parallel
Strand 4
A
191 196parallel
Strand 5
A
224 229parallel
Strand 6
A
95 100parallel
Strand 7
A
246 249parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 260first strand
Strand 2
A
406 410parallel
Strand 3
A
362 365parallel
Strand 4
A
293 296parallel
Strand 5
A
342 347parallel
Strand 6
A
318 322parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 370first strand
Strand 2
A
385 387anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
381 382anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 675first strand
Strand 2
A
679 681anti-parallel
Strand 3
A
651 654parallel
Strand 4
A
644 645anti-parallel
Strand 5
A
634 637anti-parallel
Strand 6
A
667 670anti-parallel
Strand 7
A
684 686anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
701 710first strand
Strand 2
A
715 724anti-parallel
Strand 3
A
727 736anti-parallel
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