Analysis of interatomic Contacts of Structural Units in PDB entry:
8PSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PSV entry

There are 6 chains in PDB entry 8PSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLN 159
B
 ALA 2GLN 159
C
 ALA 2GLN 159
D
 ALA 2GLN 159
E
 ALA 2GLN 159
F
 ALA 2GLN 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 8PSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 43Right-handed 310
Helix 2
AA2
B
40 43Right-handed 310
Helix 3
AA3
C
24 28Right-handed alpha
Helix 4
AA4
C
40 43Right-handed 310
Helix 5
AA5
D
40 43Right-handed 310
Helix 6
AA6
E
40 43Right-handed 310
Helix 7
AA7
F
38 43Right-handed 310
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There are 19 sheets in PDB entry 8PSV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
52 61anti-parallel
Strand 3
A
127 139anti-parallel
Strand 4
A
99 104anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 38first strand
Strand 2
B
3 17parallel
Strand 3
A
150 159anti-parallel
Strand 4
A
68 74anti-parallel
Strand 5
A
122 123anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 38first strand
Strand 2
B
3 17parallel
Strand 3
A
146 147anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
52 61anti-parallel
Strand 3
B
127 140anti-parallel
Strand 4
B
45 48anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
52 61anti-parallel
Strand 3
B
127 140anti-parallel
Strand 4
B
99 104anti-parallel
Strand 5
B
85 87anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 38first strand
Strand 2
C
3 17parallel
Strand 3
B
150 158anti-parallel
Strand 4
B
68 74anti-parallel
Strand 5
B
122 123anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 38first strand
Strand 2
C
3 17parallel
Strand 3
B
146 147anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
22 23first strand
Strand 2
C
52 61anti-parallel
Strand 3
C
127 139anti-parallel
Strand 4
C
99 104anti-parallel
Strand 5
C
86 87anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 38first strand
Strand 2
D
3 17parallel
Strand 3
C
150 159anti-parallel
Strand 4
C
68 74anti-parallel
Strand 5
C
122 123anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 38first strand
Strand 2
D
3 17parallel
Strand 3
C
146 147anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
22 23first strand
Strand 2
D
52 61anti-parallel
Strand 3
D
127 139anti-parallel
Strand 4
D
99 104anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 38first strand
Strand 2
E
3 17parallel
Strand 3
D
150 158anti-parallel
Strand 4
D
68 74anti-parallel
Strand 5
D
122 123anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 38first strand
Strand 2
E
3 17parallel
Strand 3
D
146 147anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
22 23first strand
Strand 2
E
52 61anti-parallel
Strand 3
E
127 140anti-parallel
Strand 4
E
45 48anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
22 23first strand
Strand 2
E
52 61anti-parallel
Strand 3
E
127 140anti-parallel
Strand 4
E
99 104anti-parallel
Strand 5
E
85 87anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
29 38first strand
Strand 2
F
3 17parallel
Strand 3
E
150 159anti-parallel
Strand 4
E
68 74anti-parallel
Strand 5
E
122 123anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
29 38first strand
Strand 2
F
3 17parallel
Strand 3
E
146 147anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
22 23first strand
Strand 2
F
52 61anti-parallel
Strand 3
F
127 139anti-parallel
Strand 4
F
99 104anti-parallel
Strand 5
F
85 87anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
122 123first strand
Strand 2
F
68 74anti-parallel
Strand 3
F
153 159anti-parallel
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