Analysis of interatomic Contacts of Structural Units in PDB entry:
8PVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PVE entry

There is 1 chain in PDB entry 8PVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4SER 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8PVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 14Right-handed 310
Helix 2
AA2
A
15 20Right-handed alpha
Helix 3
AA3
A
29 41Right-handed alpha
Helix 4
AA4
A
54 63Right-handed alpha
Helix 5
AA5
A
70 76Right-handed alpha
Helix 6
AA6
A
85 97Right-handed alpha
Helix 7
AA7
A
112 117Right-handed alpha
Helix 8
AA8
A
174 186Right-handed alpha
Helix 9
AA9
A
197 212Right-handed alpha
Helix 10
AB1
A
214 231Right-handed alpha
Helix 11
AB2
A
234 243Right-handed alpha
Helix 12
AB3
A
245 265Right-handed alpha
Helix 13
AB4
A
266 281Right-handed alpha
Helix 14
AB5
A
282 299Right-handed alpha
Helix 15
AB6
A
300 312Right-handed alpha
Helix 16
AB7
A
314 326Right-handed alpha
Helix 17
AB8
A
327 342Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8PVE.

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 8first strand
Strand 2
A
193 195anti-parallel
Strand 3
A
163 169parallel
Strand 4
A
127 133anti-parallel
Strand 5
A
106 109parallel
Strand 6
A
79 82parallel
Strand 7
A
23 26parallel
Strand 8
A
46 50parallel
Strand 9
A
67 69parallel
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