Analysis of interatomic Contacts of Structural Units in PDB entry:
8PVQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PVQ entry

There is 1 chain in PDB entry 8PVQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2VAL 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 8PVQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
150 154Right-handed 310
Helix 2
AA2
A
170 178Right-handed alpha
Helix 3
AA3
A
181 185Right-handed 310
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There are 2 sheets in PDB entry 8PVQ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 119first strand
Strand 2
A
106 111anti-parallel
Strand 3
A
94 101anti-parallel
Strand 4
A
32 41anti-parallel
Strand 5
A
157 165anti-parallel
Strand 6
A
8 11anti-parallel
Strand 7
A
204 206anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
62 66anti-parallel
Strand 4
A
48 54anti-parallel
Strand 5
A
133 136anti-parallel
Strand 6
A
19 23anti-parallel
Strand 7
A
196 200anti-parallel
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