Analysis of interatomic Contacts of Structural Units in PDB entry:
8PVW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PVW entry

There is 1 chain in PDB entry 8PVW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8PVW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 25Right-handed alpha
Helix 2
AA2
A
31 42Right-handed alpha
Helix 3
AA3
A
48 55Right-handed alpha
Helix 4
AA4
A
60 73Right-handed alpha
Helix 5
AA5
A
74 78Right-handed 310
Helix 6
AA6
A
89 99Right-handed alpha
Helix 7
AA7
A
112 128Right-handed alpha
Helix 8
AA8
A
129 132Right-handed 310
Helix 9
AA9
A
133 148Right-handed alpha
Helix 10
AB1
A
149 161Right-handed alpha
Helix 11
AB2
A
174 187Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8PVW.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
81 84parallel
Strand 3
A
2 7parallel
Strand 4
A
105 110parallel
Strand 5
A
165 170parallel
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