Analysis of interatomic Contacts of Structural Units in PDB entry:
8PWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PWL entry

There are 2 chains in PDB entry 8PWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 902
B
 MET 1GLY 787
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 8PWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
26 32Right-handed alpha
Helix 3
AA3
A
35 40Right-handed alpha
Helix 4
AA4
A
42 52Right-handed alpha
Helix 5
AA5
A
67 76Right-handed alpha
Helix 6
AA6
A
78 88Right-handed alpha
Helix 7
AA7
A
100 108Right-handed alpha
Helix 8
AA8
A
110 120Right-handed alpha
Helix 9
AA9
A
133 142Right-handed alpha
Helix 10
AB1
A
143 153Right-handed alpha
Helix 11
AB2
A
166 175Right-handed alpha
Helix 12
AB3
A
176 186Right-handed alpha
Helix 13
AB4
A
199 208Right-handed alpha
Helix 14
AB5
A
209 219Right-handed alpha
Helix 15
AB6
A
231 238Right-handed alpha
Helix 16
AB7
A
241 252Right-handed alpha
Helix 17
AB8
A
253 260Right-handed alpha
Helix 18
AB9
A
269 282Right-handed alpha
Helix 19
AC1
A
284 307Right-handed alpha
Helix 20
AC2
A
313 334Right-handed alpha
Helix 21
AC3
A
351 383Right-handed alpha
Helix 22
AC4
A
444 465Right-handed alpha
Helix 23
AC5
A
473 483Right-handed alpha
Helix 24
AC6
A
483 494Right-handed alpha
Helix 25
AC7
A
496 501Right-handed alpha
Helix 26
AC8
A
502 507Right-handed 310
Helix 27
AC9
A
508 515Right-handed alpha
Helix 28
AD1
A
515 520Right-handed alpha
Helix 29
AD2
A
525 537Right-handed alpha
Helix 30
AD3
A
558 560Right-handed 310
Helix 31
AD4
A
561 573Right-handed alpha
Helix 32
AD5
A
574 581Right-handed alpha
Helix 33
AD6
A
593 609Right-handed alpha
Helix 34
AD7
A
630 634Right-handed 310
Helix 35
AD8
A
636 654Right-handed alpha
Helix 36
AD9
A
663 672Right-handed alpha
Helix 37
AE1
A
676 684Right-handed alpha
Helix 38
AE2
A
684 695Right-handed alpha
Helix 39
AE3
A
736 751Right-handed alpha
Helix 40
AE4
A
753 766Right-handed alpha
Helix 41
AE5
A
769 774Right-handed alpha
Helix 42
AE6
A
777 787Right-handed alpha
Helix 43
AE7
A
792 799Right-handed alpha
Helix 44
AE8
A
810 823Right-handed alpha
Helix 45
AE9
A
824 836Right-handed alpha
Helix 46
AF1
A
887 901Right-handed alpha
Helix 47
AF2
B
3 17Right-handed alpha
Helix 48
AF3
B
26 39Right-handed alpha
Helix 49
AF4
B
42 52Right-handed alpha
Helix 50
AF5
B
67 76Right-handed alpha
Helix 51
AF6
B
78 87Right-handed alpha
Helix 52
AF7
B
100 109Right-handed alpha
Helix 53
AF8
B
110 120Right-handed alpha
Helix 54
AF9
B
133 142Right-handed alpha
Helix 55
AG1
B
143 152Right-handed alpha
Helix 56
AG2
B
166 175Right-handed alpha
Helix 57
AG3
B
176 186Right-handed alpha
Helix 58
AG4
B
199 208Right-handed alpha
Helix 59
AG5
B
209 219Right-handed alpha
Helix 60
AG6
B
231 240Right-handed alpha
Helix 61
AG7
B
241 252Right-handed alpha
Helix 62
AG8
B
254 262Right-handed alpha
Helix 63
AG9
B
269 280Right-handed alpha
Helix 64
AH1
B
284 309Right-handed alpha
Helix 65
AH2
B
312 334Right-handed alpha
Helix 66
AH3
B
353 383Right-handed alpha
Helix 67
AH4
B
444 465Right-handed alpha
Helix 68
AH5
B
473 483Right-handed alpha
Helix 69
AH6
B
483 494Right-handed alpha
Helix 70
AH7
B
496 501Right-handed alpha
Helix 71
AH8
B
502 507Right-handed 310
Helix 72
AH9
B
508 520Right-handed alpha
Helix 73
AI1
B
523 536Right-handed alpha
Helix 74
AI2
B
561 573Right-handed alpha
Helix 75
AI3
B
574 581Right-handed alpha
Helix 76
AI4
B
593 610Right-handed alpha
Helix 77
AI5
B
611 614Right-handed 310
Helix 78
AI6
B
636 654Right-handed alpha
Helix 79
AI7
B
663 672Right-handed alpha
Helix 80
AI8
B
676 682Right-handed alpha
Helix 81
AI9
B
684 696Right-handed alpha
Helix 82
AJ1
B
737 751Right-handed alpha
Helix 83
AJ2
B
753 766Right-handed alpha
Helix 84
AJ3
B
769 774Right-handed alpha
Helix 85
AJ4
B
777 787Right-handed alpha
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There are 8 sheets in PDB entry 8PWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 557first strand
Strand 2
A
584 586parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
625 627anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
709 714first strand
Strand 2
A
717 722anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
850 851first strand
Strand 2
A
854 855anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
859 863first strand
Strand 2
A
879 883parallel
Strand 3
A
872 874anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
554 557first strand
Strand 2
B
583 586parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
616 618first strand
Strand 2
B
625 627anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
710 714first strand
Strand 2
B
717 721anti-parallel
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