Analysis of interatomic Contacts of Structural Units in PDB entry:
8PX7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PX7 entry

There is 1 chain in PDB entry 8PX7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 1034
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 8PX7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 6Right-handed alpha
Helix 2
AA2
A
9 30Right-handed alpha
Helix 3
AA3
A
53 69Right-handed alpha
Helix 4
AA4
A
99 115Right-handed alpha
Helix 5
AA5
A
116 118Right-handed 310
Helix 6
AA6
A
119 126Right-handed alpha
Helix 7
AA7
A
150 162Right-handed alpha
Helix 8
AA8
A
162 169Right-handed alpha
Helix 9
AA9
A
189 196Right-handed alpha
Helix 10
AB1
A
199 211Right-handed alpha
Helix 11
AB2
A
242 248Right-handed alpha
Helix 12
AB3
A
262 265Right-handed alpha
Helix 13
AB4
A
299 314Right-handed alpha
Helix 14
AB5
A
315 317Right-handed 310
Helix 15
AB6
A
329 359Right-handed alpha
Helix 16
AB7
A
361 386Right-handed alpha
Helix 17
AB8
A
391 423Right-handed alpha
Helix 18
AB9
A
426 454Right-handed alpha
Helix 19
AC1
A
455 458Right-handed 310
Helix 20
AC2
A
461 488Right-handed alpha
Helix 21
AC3
A
488 494Right-handed alpha
Helix 22
AC4
A
512 537Right-handed alpha
Helix 23
AC5
A
537 559Right-handed alpha
Helix 24
AC6
A
583 601Right-handed alpha
Helix 25
AC7
A
643 656Right-handed alpha
Helix 26
AC8
A
691 708Right-handed alpha
Helix 27
AC9
A
732 740Right-handed alpha
Helix 28
AD1
A
742 755Right-handed alpha
Helix 29
AD2
A
777 781Right-handed 310
Helix 30
AD3
A
782 787Right-handed 310
Helix 31
AD4
A
801 804Right-handed alpha
Helix 32
AD5
A
836 848Right-handed alpha
Helix 33
AD6
A
872 893Right-handed alpha
Helix 34
AD7
A
898 903Right-handed alpha
Helix 35
AD8
A
904 920Right-handed alpha
Helix 36
AD9
A
924 956Right-handed alpha
Helix 37
AE1
A
960 986Right-handed alpha
Helix 38
AE2
A
986 992Right-handed alpha
Helix 39
AE3
A
996 1017Right-handed alpha
Helix 40
AE4
A
1017 1033Right-handed alpha
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There are 9 sheets in PDB entry 8PX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
42 47anti-parallel
Strand 3
A
88 94anti-parallel
Strand 4
A
75 83anti-parallel
Strand 5
A
815 819anti-parallel
Strand 6
A
822 824anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 177first strand
Strand 2
A
289 294anti-parallel
Strand 3
A
132 144anti-parallel
Strand 4
A
321 328anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 272first strand
Strand 2
A
182 188anti-parallel
Strand 3
A
768 775parallel
Strand 4
A
757 763anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 219first strand
Strand 2
A
232 234anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 253first strand
Strand 2
A
259 261anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 286first strand
Strand 2
A
278 281anti-parallel
Strand 3
A
606 613anti-parallel
Strand 4
A
624 631anti-parallel
Strand 5
A
571 577anti-parallel
Strand 6
A
662 667anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 718first strand
Strand 2
A
826 831anti-parallel
Strand 3
A
680 686anti-parallel
Strand 4
A
855 859anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 731first strand
Strand 2
A
805 812anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 792first strand
Strand 2
A
798 800anti-parallel
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