Analysis of interatomic Contacts of Structural Units in PDB entry:
8PXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PXB entry

There are 2 chains in PDB entry 8PXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 17PRO 546
A
 GLN 17PRO 546
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 8PXB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
19 45Right-handed alpha
Helix 2
AA2
B
50 68Right-handed alpha
Helix 3
AA3
B
115 121Right-handed alpha
Helix 4
AA4
B
132 137Right-handed alpha
Helix 5
AA5
B
138 149Right-handed alpha
Helix 6
AA6
B
158 192Right-handed alpha
Helix 7
AA7
B
200 211Right-handed alpha
Helix 8
AA8
B
216 227Right-handed alpha
Helix 9
AA9
B
229 257Right-handed alpha
Helix 10
AB1
B
270 303Right-handed alpha
Helix 11
AB2
B
304 307Right-handed 310
Helix 12
AB3
B
308 330Right-handed alpha
Helix 13
AB4
B
333 349Right-handed alpha
Helix 14
AB5
B
350 352Right-handed 310
Helix 15
AB6
B
354 381Right-handed alpha
Helix 16
AB7
B
393 422Right-handed alpha
Helix 17
AB8
B
431 438Right-handed alpha
Helix 18
AB9
B
442 452Right-handed alpha
Helix 19
AC1
B
455 487Right-handed alpha
Helix 20
AC2
B
524 535Right-handed alpha
Helix 21
AC3
B
535 541Right-handed alpha
Helix 22
AC4
A
19 45Right-handed alpha
Helix 23
AC5
A
50 68Right-handed alpha
Helix 24
AC6
A
115 121Right-handed alpha
Helix 25
AC7
A
132 137Right-handed alpha
Helix 26
AC8
A
138 149Right-handed alpha
Helix 27
AC9
A
158 192Right-handed alpha
Helix 28
AD1
A
200 211Right-handed alpha
Helix 29
AD2
A
216 227Right-handed alpha
Helix 30
AD3
A
229 257Right-handed alpha
Helix 31
AD4
A
270 303Right-handed alpha
Helix 32
AD5
A
304 307Right-handed 310
Helix 33
AD6
A
308 330Right-handed alpha
Helix 34
AD7
A
333 349Right-handed alpha
Helix 35
AD8
A
350 352Right-handed 310
Helix 36
AD9
A
354 381Right-handed alpha
Helix 37
AE1
A
393 422Right-handed alpha
Helix 38
AE2
A
431 438Right-handed alpha
Helix 39
AE3
A
442 452Right-handed alpha
Helix 40
AE4
A
455 487Right-handed alpha
Helix 41
AE5
A
524 535Right-handed alpha
Helix 42
AE6
A
535 541Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8PXB.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
100 109anti-parallel
Strand 3
A
100 109anti-parallel
Strand 4
A
92 97anti-parallel
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