Analysis of interatomic Contacts of Structural Units in PDB entry:
8PZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PZ4 entry

There is 1 chain in PDB entry 8PZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2PHE 479
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 8PZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
326 330Right-handed 310
Helix 2
AA2
A
458 461Right-handed 310
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There are 2 sheets in PDB entry 8PZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 43first strand
Strand 2
A
55 70anti-parallel
Strand 3
A
73 84anti-parallel
Strand 4
A
113 124anti-parallel
Strand 5
A
133 143anti-parallel
Strand 6
A
151 162anti-parallel
Strand 7
A
166 174anti-parallel
Strand 8
A
193 205anti-parallel
Strand 9
A
208 219anti-parallel
Strand 10
A
237 250anti-parallel
Strand 11
A
261 282anti-parallel
Strand 12
A
285 308anti-parallel
Strand 13
A
313 322anti-parallel
Strand 14
A
366 377anti-parallel
Strand 15
A
381 392anti-parallel
Strand 16
A
414 427anti-parallel
Strand 17
A
445 456anti-parallel
Strand 18
A
468 479anti-parallel
Strand 19
A
31 43anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
342 343first strand
Strand 2
A
352 353anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il