Analysis of interatomic Contacts of Structural Units in PDB entry:
8PZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PZG entry

There are 2 chains in PDB entry 8PZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ALA 299
B
 THR 2ALA 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8PZG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 39Right-handed 310
Helix 2
AA2
A
40 50Right-handed alpha
Helix 3
AA3
A
73 83Right-handed alpha
Helix 4
AA4
A
92 108Right-handed alpha
Helix 5
AA5
A
118 131Right-handed alpha
Helix 6
AA6
A
154 163Right-handed alpha
Helix 7
AA7
A
169 184Right-handed alpha
Helix 8
AA8
A
192 207Right-handed alpha
Helix 9
AA9
A
209 211Right-handed 310
Helix 10
AB1
A
212 223Right-handed alpha
Helix 11
AB2
A
226 231Right-handed alpha
Helix 12
AB3
A
249 260Right-handed alpha
Helix 13
AB4
A
276 278Right-handed 310
Helix 14
AB5
A
279 296Right-handed alpha
Helix 15
AB6
B
35 39Right-handed 310
Helix 16
AB7
B
40 50Right-handed alpha
Helix 17
AB8
B
73 83Right-handed alpha
Helix 18
AB9
B
92 107Right-handed alpha
Helix 19
AC1
B
118 131Right-handed alpha
Helix 20
AC2
B
154 163Right-handed alpha
Helix 21
AC3
B
169 185Right-handed alpha
Helix 22
AC4
B
192 207Right-handed alpha
Helix 23
AC5
B
211 223Right-handed alpha
Helix 24
AC6
B
226 231Right-handed alpha
Helix 25
AC7
B
250 260Right-handed alpha
Helix 26
AC8
B
276 278Right-handed 310
Helix 27
AC9
B
279 297Right-handed alpha
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There are 2 sheets in PDB entry 8PZG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
11 17anti-parallel
Strand 3
A
52 57anti-parallel
Strand 4
A
24 29parallel
Strand 5
A
112 117parallel
Strand 6
A
135 141parallel
Strand 7
A
237 242parallel
Strand 8
A
264 268parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 8first strand
Strand 2
B
11 17anti-parallel
Strand 3
B
52 57anti-parallel
Strand 4
B
24 29parallel
Strand 5
B
112 117parallel
Strand 6
B
135 141parallel
Strand 7
B
237 242parallel
Strand 8
B
264 268parallel
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