Analysis of interatomic Contacts of Structural Units in PDB entry:
8PZK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8PZK entry

There are 2 chains in PDB entry 8PZK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0MET 83
A
 ASP 85PHE 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8PZK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed alpha
Helix 2
AA2
A
19 29Right-handed alpha
Helix 3
AA3
A
32 47Right-handed alpha
Helix 4
AA4
A
64 74Right-handed alpha
Helix 5
AA5
A
75 89Right-handed alpha
Helix 6
AA6
A
92 101Right-handed alpha
Helix 7
AA7
A
102 119Right-handed alpha
Helix 8
AA8
A
132 145Right-handed alpha
Helix 9
AA9
A
146 161Right-handed alpha
Helix 10
AB1
A
195 208Right-handed alpha
Helix 11
AB2
A
209 215Right-handed alpha
Helix 12
AB3
A
233 245Right-handed alpha
Helix 13
AB4
A
277 281Right-handed 310
Helix 14
AB5
A
307 314Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8PZK.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
217 224anti-parallel
Strand 3
A
297 304parallel
Strand 4
A
283 291anti-parallel
Strand 5
A
263 273anti-parallel
Strand 6
A
249 260anti-parallel
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