Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q51

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Q51 entry

There is 1 chain in PDB entry 8Q51 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 36	PRO 1244

There are 20 helices in PDB entry 8Q51. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	102	Right-handed 310
Helix 2	AA2	A	118	122	Right-handed 310
Helix 3	AA3	A	217	223	Right-handed alpha
Helix 4	AA4	A	348	352	Right-handed 310
Helix 5	AA5	A	356	371	Right-handed alpha
Helix 6	AA6	A	383	394	Right-handed alpha
Helix 7	AA7	A	413	416	Right-handed 310
Helix 8	AA8	A	417	434	Right-handed alpha
Helix 9	AA9	A	448	452	Right-handed 310
Helix 10	AB1	A	453	469	Right-handed alpha
Helix 11	AB2	A	494	504	Right-handed alpha
Helix 12	AB3	A	512	516	Right-handed 310
Helix 13	AB4	A	517	523	Right-handed alpha
Helix 14	AB5	A	573	583	Right-handed alpha
Helix 15	AB6	A	602	606	Right-handed 310
Helix 16	AB7	A	626	637	Right-handed alpha
Helix 17	AB8	A	846	851	Right-handed alpha
Helix 18	AB9	A	897	902	Right-handed alpha
Helix 19	AC1	A	971	977	Right-handed 310
Helix 20	AC2	A	1032	1037	Right-handed 310

There are 22 sheets in PDB entry 8Q51. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	A	196	201	anti-parallel
Strand 3	A	125	130	anti-parallel
Strand 4	A	156	159	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	79	first strand
Strand 2	A	53	57	anti-parallel
Strand 3	A	107	115	anti-parallel
Strand 4	A	171	179	anti-parallel
Strand 5	A	137	141	anti-parallel
Strand 6	A	144	149	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	214	first strand
Strand 2	A	226	237	anti-parallel
Strand 3	A	273	284	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	263	first strand
Strand 2	A	243	252	anti-parallel
Strand 3	A	267	269	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	263	first strand
Strand 2	A	243	252	anti-parallel
Strand 3	A	297	304	anti-parallel
Strand 4	A	309	317	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	322	324	first strand
Strand 2	A	330	332	anti-parallel
Strand 3	A	335	336	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	344	first strand
Strand 2	A	374	377	parallel
Strand 3	A	396	400	parallel
Strand 4	A	439	446	parallel
Strand 5	A	476	480	parallel
Strand 6	A	506	510	parallel
Strand 7	A	528	533	parallel
Strand 8	A	589	592	parallel
Strand 9	A	339	344	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	642	644	first strand
Strand 2	A	655	662	anti-parallel
Strand 3	A	702	707	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	674	680	first strand
Strand 2	A	666	671	anti-parallel
Strand 3	A	712	718	anti-parallel
Strand 4	A	724	731	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	685	first strand
Strand 2	A	691	694	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	738	743	first strand
Strand 2	A	755	763	anti-parallel
Strand 3	A	812	819	anti-parallel
Strand 4	A	785	791	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	747	749	first strand
Strand 2	A	838	845	parallel
Strand 3	A	824	831	anti-parallel
Strand 4	A	776	783	anti-parallel
Strand 5	A	805	807	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	855	858	first strand
Strand 2	A	879	881	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	861	865	first strand
Strand 2	A	921	926	parallel
Strand 3	A	905	913	anti-parallel
Strand 4	A	889	893	anti-parallel
Strand 5	A	876	877	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	936	937	first strand
Strand 2	A	994	999	parallel
Strand 3	A	980	987	anti-parallel
Strand 4	A	965	967	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	952	953	first strand
Strand 2	A	961	962	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1020	1023	first strand
Strand 2	A	1062	1067	anti-parallel
Strand 3	A	1131	1138	anti-parallel
Strand 4	A	1090	1099	anti-parallel
Strand 5	A	1102	1105	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1050	1051	first strand
Strand 2	A	1144	1151	anti-parallel
Strand 3	A	1078	1081	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1050	1051	first strand
Strand 2	A	1144	1151	anti-parallel
Strand 3	A	1087	1088	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1165	1170	first strand
Strand 2	A	1198	1202	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1188	1189	first strand
Strand 2	A	1240	1241	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1207	1208	first strand
Strand 2	A	1220	1226	anti-parallel
Strand 3	A	1231	1237	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Q51

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q51