Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q59 entry

There are 2 chains in PDB entry 8Q59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 288
B
 MET 1ALA 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8Q59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
27 42Right-handed alpha
Helix 3
AA3
A
50 58Right-handed alpha
Helix 4
AA4
A
58 69Right-handed alpha
Helix 5
AA5
A
86 96Right-handed alpha
Helix 6
AA6
A
109 127Right-handed alpha
Helix 7
AA7
A
156 168Right-handed alpha
Helix 8
AA8
A
190 201Right-handed alpha
Helix 9
AA9
A
214 224Right-handed alpha
Helix 10
AB1
A
232 250Right-handed alpha
Helix 11
AB2
A
255 279Right-handed alpha
Helix 12
AB3
A
282 288Right-handed 310
Helix 13
AB4
B
5 16Right-handed alpha
Helix 14
AB5
B
27 42Right-handed alpha
Helix 15
AB6
B
50 58Right-handed alpha
Helix 16
AB7
B
58 69Right-handed alpha
Helix 17
AB8
B
86 96Right-handed alpha
Helix 18
AB9
B
109 127Right-handed alpha
Helix 19
AC1
B
156 168Right-handed alpha
Helix 20
AC2
B
190 201Right-handed alpha
Helix 21
AC3
B
214 224Right-handed alpha
Helix 22
AC4
B
232 250Right-handed alpha
Helix 23
AC5
B
255 279Right-handed alpha
Helix 24
AC6
B
282 288Right-handed 310
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There are 2 sheets in PDB entry 8Q59. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
45 49parallel
Strand 3
A
77 84parallel
Strand 4
A
100 103parallel
Strand 5
A
130 135parallel
Strand 6
A
171 174parallel
Strand 7
A
205 207parallel
Strand 8
A
226 231parallel
Strand 9
A
20 24parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
45 49parallel
Strand 3
B
77 84parallel
Strand 4
B
100 103parallel
Strand 5
B
130 135parallel
Strand 6
B
171 174parallel
Strand 7
B
205 207parallel
Strand 8
B
226 231parallel
Strand 9
B
20 24parallel
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