Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q6F entry

There is 1 chain in PDB entry 8Q6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 304MET 801
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8Q6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
307 325Right-handed alpha
Helix 2
AA2
A
329 345Right-handed alpha
Helix 3
AA3
A
346 348Right-handed 310
Helix 4
AA4
A
367 371Right-handed 310
Helix 5
AA5
A
393 397Right-handed 310
Helix 6
AA6
A
516 520Right-handed alpha
Helix 7
AA7
A
521 533Right-handed alpha
Helix 8
AA8
A
554 575Right-handed alpha
Helix 9
AA9
A
604 612Right-handed alpha
Helix 10
AB1
A
614 623Right-handed alpha
Helix 11
AB2
A
628 653Right-handed alpha
Helix 12
AB3
A
696 703Right-handed alpha
Helix 13
AB4
A
708 728Right-handed alpha
Helix 14
AB5
A
728 743Right-handed alpha
Helix 15
AB6
A
751 760Right-handed alpha
Helix 16
AB7
A
766 782Right-handed alpha
Helix 17
AB8
A
785 791Right-handed alpha
Helix 18
AB9
A
792 796Right-handed 310
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There are 3 sheets in PDB entry 8Q6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 365first strand
Strand 2
A
382 390anti-parallel
Strand 3
A
372 373anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 365first strand
Strand 2
A
382 390anti-parallel
Strand 3
A
541 549anti-parallel
Strand 4
A
593 595anti-parallel
Strand 5
A
585 587anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 603first strand
Strand 2
A
662 665anti-parallel
Strand 3
A
670 672anti-parallel
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