Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q6G entry

There is 1 chain in PDB entry 8Q6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 303MET 801
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8Q6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
307 325Right-handed alpha
Helix 2
AA2
A
329 346Right-handed alpha
Helix 3
AA3
A
521 533Right-handed alpha
Helix 4
AA4
A
554 574Right-handed alpha
Helix 5
AA5
A
604 612Right-handed alpha
Helix 6
AA6
A
614 623Right-handed alpha
Helix 7
AA7
A
628 653Right-handed alpha
Helix 8
AA8
A
696 703Right-handed alpha
Helix 9
AA9
A
708 728Right-handed alpha
Helix 10
AB1
A
728 743Right-handed alpha
Helix 11
AB2
A
751 760Right-handed alpha
Helix 12
AB3
A
766 782Right-handed alpha
Helix 13
AB4
A
785 791Right-handed alpha
Helix 14
AB5
A
792 796Right-handed 310
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There are 3 sheets in PDB entry 8Q6G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 365first strand
Strand 2
A
382 390anti-parallel
Strand 3
A
372 373anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 365first strand
Strand 2
A
382 390anti-parallel
Strand 3
A
541 549anti-parallel
Strand 4
A
593 595anti-parallel
Strand 5
A
585 587anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
601 603first strand
Strand 2
A
662 665anti-parallel
Strand 3
A
670 672anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il