Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q6P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Q6P entry

There are 7 chains in PDB entry 8Q6P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
2	LEU 441	PHE 886
3	GLU 271	LEU 658
4	GLN 438	ALA 773
5	ALA 314	GLY 656
6	ASP 321	LEU 784
7	GLU 317	GLY 645
L	SER 378	PRO 394

There are 95 helices in PDB entry 8Q6P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	2	442	455	Right-handed alpha
Helix 2	AA2	2	458	466	Right-handed alpha
Helix 3	AA3	2	473	486	Right-handed alpha
Helix 4	AA4	2	514	525	Right-handed alpha
Helix 5	AA5	2	561	565	Right-handed 310
Helix 6	AA6	2	578	592	Right-handed alpha
Helix 7	AA7	2	627	632	Right-handed alpha
Helix 8	AA8	2	635	642	Right-handed alpha
Helix 9	AA9	2	653	671	Right-handed alpha
Helix 10	AB1	2	698	709	Right-handed alpha
Helix 11	AB2	2	721	740	Right-handed alpha
Helix 12	AB3	2	745	763	Right-handed alpha
Helix 13	AB4	2	769	787	Right-handed alpha
Helix 14	AB5	2	789	800	Right-handed alpha
Helix 15	AB6	2	802	806	Right-handed 310
Helix 16	AB7	2	809	833	Right-handed alpha
Helix 17	AB8	2	844	854	Right-handed alpha
Helix 18	AB9	2	858	865	Right-handed alpha
Helix 19	AC1	2	865	871	Right-handed alpha
Helix 20	AC2	3	277	291	Right-handed alpha
Helix 21	AC3	3	294	304	Right-handed alpha
Helix 22	AC4	3	310	323	Right-handed alpha
Helix 23	AC5	3	350	362	Right-handed alpha
Helix 24	AC6	3	396	401	Right-handed alpha
Helix 25	AC7	3	415	428	Right-handed alpha
Helix 26	AC8	3	434	438	Right-handed 310
Helix 27	AC9	3	464	470	Right-handed alpha
Helix 28	AD1	3	473	479	Right-handed alpha
Helix 29	AD2	3	490	506	Right-handed alpha
Helix 30	AD3	3	564	578	Right-handed alpha
Helix 31	AD4	3	583	603	Right-handed alpha
Helix 32	AD5	3	615	633	Right-handed alpha
Helix 33	AD6	3	638	655	Right-handed alpha
Helix 34	AD7	4	442	455	Right-handed alpha
Helix 35	AD8	4	457	466	Right-handed alpha
Helix 36	AD9	4	473	486	Right-handed alpha
Helix 37	AE1	4	492	496	Right-handed 310
Helix 38	AE2	4	515	527	Right-handed alpha
Helix 39	AE3	4	580	593	Right-handed alpha
Helix 40	AE4	4	629	635	Right-handed alpha
Helix 41	AE5	4	637	643	Right-handed alpha
Helix 42	AE6	4	655	672	Right-handed alpha
Helix 43	AE7	4	673	681	Right-handed alpha
Helix 44	AE8	4	683	697	Right-handed alpha
Helix 45	AE9	4	703	723	Right-handed alpha
Helix 46	AF1	4	730	748	Right-handed alpha
Helix 47	AF2	4	754	770	Right-handed alpha
Helix 48	AF3	5	316	329	Right-handed alpha
Helix 49	AF4	5	331	340	Right-handed alpha
Helix 50	AF5	5	347	360	Right-handed alpha
Helix 51	AF6	5	387	397	Right-handed alpha
Helix 52	AF7	5	408	412	Right-handed 310
Helix 53	AF8	5	433	438	Right-handed alpha
Helix 54	AF9	5	448	451	Right-handed 310
Helix 55	AG1	5	452	466	Right-handed alpha
Helix 56	AG2	5	509	515	Right-handed alpha
Helix 57	AG3	5	526	543	Right-handed alpha
Helix 58	AG4	5	556	571	Right-handed alpha
Helix 59	AG5	5	576	600	Right-handed alpha
Helix 60	AG6	5	610	628	Right-handed alpha
Helix 61	AG7	5	634	656	Right-handed alpha
Helix 62	AG8	6	323	331	Right-handed alpha
Helix 63	AG9	6	332	344	Right-handed alpha
Helix 64	AH1	6	347	357	Right-handed alpha
Helix 65	AH2	6	363	376	Right-handed alpha
Helix 66	AH3	6	403	415	Right-handed alpha
Helix 67	AH4	6	449	454	Right-handed alpha
Helix 68	AH5	6	463	467	Right-handed 310
Helix 69	AH6	6	468	482	Right-handed alpha
Helix 70	AH7	6	517	522	Right-handed alpha
Helix 71	AH8	6	525	532	Right-handed alpha
Helix 72	AH9	6	543	559	Right-handed alpha
Helix 73	AI1	6	570	584	Right-handed alpha
Helix 74	AI2	6	589	609	Right-handed alpha
Helix 75	AI3	6	619	637	Right-handed alpha
Helix 76	AI4	6	643	658	Right-handed alpha
Helix 77	AI5	6	719	737	Right-handed alpha
Helix 78	AI6	6	743	754	Right-handed alpha
Helix 79	AI7	6	759	777	Right-handed alpha
Helix 80	AI8	7	319	327	Right-handed alpha
Helix 81	AI9	7	330	339	Right-handed alpha
Helix 82	AJ1	7	346	359	Right-handed alpha
Helix 83	AJ2	7	364	368	Right-handed 310
Helix 84	AJ3	7	385	397	Right-handed alpha
Helix 85	AJ4	7	445	449	Right-handed 310
Helix 86	AJ5	7	450	464	Right-handed alpha
Helix 87	AJ6	7	499	504	Right-handed alpha
Helix 88	AJ7	7	507	514	Right-handed alpha
Helix 89	AJ8	7	525	543	Right-handed alpha
Helix 90	AJ9	7	554	568	Right-handed alpha
Helix 91	AK1	7	573	594	Right-handed alpha
Helix 92	AK2	7	601	619	Right-handed alpha
Helix 93	AK3	7	625	644	Right-handed alpha
Helix 94	AK4	L	379	385	Right-handed alpha
Helix 95	AK5	L	387	391	Right-handed 310

There are 23 sheets in PDB entry 8Q6P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	528	530	first strand
Strand 2	2	567	570	parallel
Strand 3	2	609	615	parallel
Strand 4	2	504	507	parallel
Strand 5	2	644	647	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	544	548	first strand
Strand 2	2	553	557	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	593	598	first strand
Strand 2	2	601	606	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	839	843	first strand
Strand 2	2	881	885	anti-parallel
Strand 3	2	873	876	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	327	328	first strand
Strand 2	3	334	335	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	365	368	first strand
Strand 2	3	405	409	parallel
Strand 3	3	447	452	parallel
Strand 4	3	341	345	parallel
Strand 5	3	481	485	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	381	384	first strand
Strand 2	3	391	394	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	430	433	first strand
Strand 2	3	440	443	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	614	617	first strand
Strand 2	4	506	509	parallel
Strand 3	4	646	649	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	701	702	first strand
Strand 2	4	752	753	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	364	365	first strand
Strand 2	5	371	372	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	402	406	first strand
Strand 2	5	442	446	parallel
Strand 3	5	484	489	parallel
Strand 4	5	378	382	parallel
Strand 5	5	517	521	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	418	421	first strand
Strand 2	5	428	431	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	469	472	first strand
Strand 2	5	475	478	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	574	575	first strand
Strand 2	5	632	633	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	380	381	first strand
Strand 2	6	387	388	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	504	505	first strand
Strand 2	6	394	398	parallel
Strand 3	6	533	538	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	419	421	first strand
Strand 2	6	458	461	parallel
Strand 3	6	500	501	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	433	438	first strand
Strand 2	6	443	448	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	483	488	first strand
Strand 2	6	491	496	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	613	614	first strand
Strand 2	6	660	661	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	400	403	first strand
Strand 2	7	439	443	parallel
Strand 3	7	481	487	parallel
Strand 4	7	376	380	parallel
Strand 5	7	516	520	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	7	465	466	first strand
Strand 2	7	477	478	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Q6P

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q6P