Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q70


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q70 entry

There is 1 chain in PDB entry 8Q70 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1GLN 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 8Q70. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 14Right-handed 310
Helix 2
AA2
A
25 38Right-handed alpha
Helix 3
AA3
A
67 72Right-handed 310
Helix 4
AA4
A
73 78Right-handed alpha
Helix 5
AA5
A
116 125Right-handed alpha
Helix 6
AA6
A
126 128Right-handed 310
Helix 7
AA7
A
134 137Right-handed 310
Helix 8
AA8
A
172 186Right-handed alpha
Helix 9
AA9
A
190 199Right-handed alpha
Helix 10
AB1
A
203 207Right-handed 310
Helix 11
AB2
A
212 214Right-handed 310
Helix 12
AB3
A
231 260Right-handed alpha
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There are 2 sheets in PDB entry 8Q70. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 46first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
216 223parallel
Strand 4
A
102 111anti-parallel
Strand 5
A
159 166anti-parallel
Strand 6
A
145 156anti-parallel
Strand 7
A
129 132anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 46first strand
Strand 2
A
55 64anti-parallel
Strand 3
A
2 9anti-parallel
Strand 4
A
83 91anti-parallel
Strand 5
A
229 230anti-parallel
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