Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q75


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q75 entry

There is 1 chain in PDB entry 8Q75 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 184LEU 957
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8Q75. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
197 210Right-handed alpha
Helix 2
AA2
A
236 246Right-handed alpha
Helix 3
AA3
A
263 293Right-handed alpha
Helix 4
AA4
A
296 300Right-handed 310
Helix 5
AA5
A
302 309Right-handed alpha
Helix 6
AA6
A
316 332Right-handed alpha
Helix 7
AA7
A
334 345Right-handed alpha
Helix 8
AA8
A
351 377Right-handed alpha
Helix 9
AA9
A
385 406Right-handed alpha
Helix 10
AB1
A
415 421Right-handed alpha
Helix 11
AB2
A
512 515Right-handed 310
Helix 12
AB3
A
516 531Right-handed alpha
Helix 13
AB4
A
537 562Right-handed alpha
Helix 14
AB5
A
562 567Right-handed alpha
Helix 15
AB6
A
571 575Right-handed 310
Helix 16
AB7
A
580 597Right-handed alpha
Helix 17
AB8
A
605 609Right-handed 310
Helix 18
AB9
A
611 620Right-handed alpha
Helix 19
AC1
A
626 633Right-handed alpha
Helix 20
AC2
A
663 675Right-handed alpha
Helix 21
AC3
A
680 697Right-handed alpha
Helix 22
AC4
A
721 725Right-handed 310
Helix 23
AC5
A
731 738Right-handed alpha
Helix 24
AC6
A
782 793Right-handed alpha
Helix 25
AC7
A
804 816Right-handed alpha
Helix 26
AC8
A
825 839Right-handed alpha
Helix 27
AC9
A
851 859Right-handed alpha
Helix 28
AD1
A
869 876Right-handed alpha
Helix 29
AD2
A
885 897Right-handed alpha
Helix 30
AD3
A
906 915Right-handed alpha
Helix 31
AD4
A
916 922Right-handed alpha
Helix 32
AD5
A
923 929Right-handed alpha
Helix 33
AD6
A
939 948Right-handed alpha
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There are 6 sheets in PDB entry 8Q75. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
225 229anti-parallel
Strand 3
A
187 193anti-parallel
Strand 4
A
255 256anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 453first strand
Strand 2
A
506 509anti-parallel
Strand 3
A
465 469anti-parallel
Strand 4
A
493 494anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 474first strand
Strand 2
A
486 488anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 623first strand
Strand 2
A
878 880anti-parallel
Strand 3
A
863 865parallel
Strand 4
A
842 847parallel
Strand 5
A
635 640parallel
Strand 6
A
796 799parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
652 653first strand
Strand 2
A
775 776anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
717 720first strand
Strand 2
A
727 730anti-parallel
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