Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Q7H entry

There are 6 chains in PDB entry 8Q7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 10	SER 2426
B	LEU 10	PHE 2430
C	ARG 21	TYR 106
N	MET 1	GLY 76
E	UNK 1	UNK 151
D	ARG 21	HIS 108

There are128 helices in PDB entry 8Q7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	69	76	Right-handed alpha
Helix 2	AA2	A	109	132	Right-handed alpha
Helix 3	AA3	A	135	154	Right-handed alpha
Helix 4	AA4	A	155	157	Right-handed 310
Helix 5	AA5	A	158	165	Right-handed alpha
Helix 6	AA6	A	166	176	Right-handed alpha
Helix 7	AA7	A	179	195	Right-handed alpha
Helix 8	AA8	A	198	210	Right-handed alpha
Helix 9	AA9	A	219	235	Right-handed alpha
Helix 10	AB1	A	252	273	Right-handed alpha
Helix 11	AB2	A	295	318	Right-handed alpha
Helix 12	AB3	A	496	508	Right-handed alpha
Helix 13	AB4	A	510	524	Right-handed alpha
Helix 14	AB5	A	540	552	Right-handed alpha
Helix 15	AB6	A	556	566	Right-handed alpha
Helix 16	AB7	A	566	572	Right-handed alpha
Helix 17	AB8	A	983	991	Right-handed alpha
Helix 18	AB9	A	992	1004	Right-handed alpha
Helix 19	AC1	A	1008	1023	Right-handed alpha
Helix 20	AC2	A	1036	1044	Right-handed alpha
Helix 21	AC3	A	1050	1065	Right-handed alpha
Helix 22	AC4	A	1069	1079	Right-handed alpha
Helix 23	AC5	A	1080	1091	Right-handed alpha
Helix 24	AC6	A	1099	1105	Right-handed alpha
Helix 25	AC7	A	1109	1141	Right-handed alpha
Helix 26	AC8	A	1148	1158	Right-handed alpha
Helix 27	AC9	A	1303	1332	Right-handed alpha
Helix 28	AD1	A	1335	1358	Right-handed alpha
Helix 29	AD2	A	1360	1384	Right-handed alpha
Helix 30	AD3	A	1392	1406	Right-handed alpha
Helix 31	AD4	A	1413	1431	Right-handed alpha
Helix 32	AD5	A	1468	1491	Right-handed alpha
Helix 33	AD6	A	1496	1517	Right-handed alpha
Helix 34	AD7	A	1519	1536	Right-handed alpha
Helix 35	AD8	A	1538	1563	Right-handed alpha
Helix 36	AD9	A	1566	1582	Right-handed alpha
Helix 37	AE1	A	1583	1585	Right-handed 310
Helix 38	AE2	A	1587	1608	Right-handed alpha
Helix 39	AE3	A	1612	1622	Right-handed alpha
Helix 40	AE4	A	1623	1625	Right-handed 310
Helix 41	AE5	A	1628	1664	Right-handed alpha
Helix 42	AE6	A	1708	1710	Right-handed 310
Helix 43	AE7	A	1721	1739	Right-handed alpha
Helix 44	AE8	A	1773	1782	Right-handed alpha
Helix 45	AE9	A	1790	1798	Right-handed alpha
Helix 46	AF1	A	1800	1812	Right-handed alpha
Helix 47	AF2	A	1864	1882	Right-handed alpha
Helix 48	AF3	A	1890	1904	Right-handed alpha
Helix 49	AF4	A	1922	1936	Right-handed alpha
Helix 50	AF5	A	1982	1988	Right-handed alpha
Helix 51	AF6	A	1998	2017	Right-handed alpha
Helix 52	AF7	A	2021	2031	Right-handed alpha
Helix 53	AF8	A	2036	2045	Right-handed alpha
Helix 54	AF9	A	2045	2053	Right-handed alpha
Helix 55	AG1	A	2093	2107	Right-handed alpha
Helix 56	AG2	A	2125	2133	Right-handed alpha
Helix 57	AG3	A	2135	2154	Right-handed alpha
Helix 58	AG4	A	2202	2213	Right-handed alpha
Helix 59	AG5	A	2293	2319	Right-handed alpha
Helix 60	AG6	A	2325	2352	Right-handed alpha
Helix 61	AG7	A	2364	2386	Right-handed alpha
Helix 62	AG8	A	2392	2400	Right-handed alpha
Helix 63	AG9	A	2404	2426	Right-handed alpha
Helix 64	AH1	B	69	76	Right-handed alpha
Helix 65	AH2	B	110	132	Right-handed alpha
Helix 66	AH3	B	135	154	Right-handed alpha
Helix 67	AH4	B	157	165	Right-handed alpha
Helix 68	AH5	B	166	176	Right-handed alpha
Helix 69	AH6	B	179	197	Right-handed alpha
Helix 70	AH7	B	197	210	Right-handed alpha
Helix 71	AH8	B	219	234	Right-handed alpha
Helix 72	AH9	B	252	273	Right-handed alpha
Helix 73	AI1	B	295	318	Right-handed alpha
Helix 74	AI2	B	319	326	Right-handed 310
Helix 75	AI3	B	496	509	Right-handed alpha
Helix 76	AI4	B	510	522	Right-handed alpha
Helix 77	AI5	B	540	553	Right-handed alpha
Helix 78	AI6	B	560	565	Right-handed alpha
Helix 79	AI7	B	567	572	Right-handed alpha
Helix 80	AI8	B	983	991	Right-handed alpha
Helix 81	AI9	B	991	1003	Right-handed alpha
Helix 82	AJ1	B	1008	1024	Right-handed alpha
Helix 83	AJ2	B	1025	1030	Right-handed 310
Helix 84	AJ3	B	1036	1043	Right-handed alpha
Helix 85	AJ4	B	1050	1068	Right-handed alpha
Helix 86	AJ5	B	1068	1078	Right-handed alpha
Helix 87	AJ6	B	1079	1087	Right-handed alpha
Helix 88	AJ7	B	1099	1106	Right-handed alpha
Helix 89	AJ8	B	1111	1141	Right-handed alpha
Helix 90	AJ9	B	1148	1158	Right-handed alpha
Helix 91	AK1	B	1303	1332	Right-handed alpha
Helix 92	AK2	B	1335	1358	Right-handed alpha
Helix 93	AK3	B	1360	1384	Right-handed alpha
Helix 94	AK4	B	1392	1405	Right-handed alpha
Helix 95	AK5	B	1413	1431	Right-handed alpha
Helix 96	AK6	B	1467	1491	Right-handed alpha
Helix 97	AK7	B	1496	1517	Right-handed alpha
Helix 98	AK8	B	1519	1536	Right-handed alpha
Helix 99	AK9	B	1538	1563	Right-handed alpha
Helix 100	AL1	B	1564	1577	Right-handed alpha
Helix 101	AL2	B	1577	1582	Right-handed alpha
Helix 102	AL3	B	1583	1585	Right-handed 310
Helix 103	AL4	B	1589	1608	Right-handed alpha
Helix 104	AL5	B	1611	1622	Right-handed alpha
Helix 105	AL6	B	1623	1625	Right-handed 310
Helix 106	AL7	B	1628	1668	Right-handed alpha
Helix 107	AL8	B	1715	1720	Right-handed alpha
Helix 108	AL9	B	1721	1739	Right-handed alpha
Helix 109	AM1	B	1773	1782	Right-handed alpha
Helix 110	AM2	B	1790	1798	Right-handed alpha
Helix 111	AM3	B	1800	1813	Right-handed alpha
Helix 112	AM4	B	1864	1884	Right-handed alpha
Helix 113	AM5	B	1885	1887	Right-handed 310
Helix 114	AM6	B	1890	1902	Right-handed alpha
Helix 115	AM7	B	1922	1937	Right-handed alpha
Helix 116	AM8	B	2294	2316	Right-handed alpha
Helix 117	AM9	B	2327	2354	Right-handed alpha
Helix 118	AN1	B	2362	2385	Right-handed alpha
Helix 119	AN2	B	2404	2430	Right-handed alpha
Helix 120	AN3	C	53	59	Right-handed alpha
Helix 121	AN4	C	81	91	Right-handed alpha
Helix 122	AN5	N	22	35	Right-handed alpha
Helix 123	AN6	E	2	18	Right-handed alpha
Helix 124	AN7	E	100	114	Right-handed alpha
Helix 125	AN8	E	122	132	Right-handed alpha
Helix 126	AN9	E	132	146	Right-handed alpha
Helix 127	AO1	D	53	59	Right-handed alpha
Helix 128	AO2	D	81	91	Right-handed alpha

There are 15 sheets in PDB entry 8Q7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	25	first strand
Strand 2	A	37	45	anti-parallel
Strand 3	A	62	68	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1695	1700	first strand
Strand 2	C	23	32	parallel
Strand 3	A	1753	1755	anti-parallel
Strand 4	A	1712	1713	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1695	1700	first strand
Strand 2	C	23	32	parallel
Strand 3	A	1759	1764	anti-parallel
Strand 4	A	1767	1772	anti-parallel
Strand 5	A	1846	1847	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1788	1789	first strand
Strand 2	A	1831	1834	anti-parallel
Strand 3	A	1818	1821	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1888	1889	first strand
Strand 2	A	1948	1951	anti-parallel
Strand 3	A	1939	1940	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1996	1997	first strand
Strand 2	A	2169	2171	anti-parallel
Strand 3	A	2157	2159	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	19	25	anti-parallel
Strand 3	B	37	45	anti-parallel
Strand 4	B	62	68	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1696	1700	first strand
Strand 2	D	23	34	parallel
Strand 3	B	1751	1763	anti-parallel
Strand 4	B	1768	1772	anti-parallel
Strand 5	B	1845	1848	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1788	1789	first strand
Strand 2	B	1831	1833	anti-parallel
Strand 3	B	1819	1820	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1888	1889	first strand
Strand 2	B	1948	1951	anti-parallel
Strand 3	B	1939	1941	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	78	80	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	2	6	first strand
Strand 2	N	12	16	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	48	49	first strand
Strand 2	N	41	45	anti-parallel
Strand 3	N	68	71	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	22	27	first strand
Strand 2	E	34	39	anti-parallel
Strand 3	E	51	56	anti-parallel
Strand 4	E	68	69	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	72	first strand
Strand 2	D	78	80	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Q7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q7H