Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q7R entry

There are 8 chains in PDB entry 8Q7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 647
H
 LEU 3ARG 617
U
 MET 1GLY 75
F
 CYS 442PRO 455
C
 THR 7LEU 187
D
 MET 17CYS 112
G
 MET 1LEU 99
R
 ARG 21LYS 105
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 79 helices in PDB entry 8Q7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed alpha
Helix 2
2
A
21 25Right-handed alpha
Helix 3
3
A
33 46Right-handed alpha
Helix 4
4
A
54 78Right-handed alpha
Helix 5
5
A
86 104Right-handed alpha
Helix 6
6
A
106 111Right-handed alpha
Helix 7
7
A
139 152Right-handed alpha
Helix 8
8
A
156 170Right-handed alpha
Helix 9
9
A
178 189Right-handed alpha
Helix 10
10
A
200 228Right-handed alpha
Helix 11
11
A
235 251Right-handed alpha
Helix 12
12
A
259 274Right-handed alpha
Helix 13
13
A
278 285Right-handed alpha
Helix 14
14
A
291 303Right-handed alpha
Helix 15
15
A
308 328Right-handed alpha
Helix 16
16
A
337 358Right-handed alpha
Helix 17
17
A
362 376Right-handed alpha
Helix 18
18
A
387 398Right-handed alpha
Helix 19
19
A
410 424Right-handed alpha
Helix 20
20
A
429 444Right-handed alpha
Helix 21
21
A
453 465Right-handed alpha
Helix 22
22
A
470 496Right-handed alpha
Helix 23
1
A
531 547Right-handed alpha
Helix 24
3
A
579 589Right-handed alpha
Helix 25
4
A
596 603Right-handed alpha
Helix 26
5
A
607 619Right-handed alpha
Helix 27
23
C
9 22Right-handed alpha
Helix 28
24
C
95 97Right-handed alpha
Helix 29
25
C
119 132Right-handed alpha
Helix 30
26
C
142 154Right-handed alpha
Helix 31
27
C
159 179Right-handed alpha
Helix 32
28
D
33 38Right-handed alpha
Helix 33
29
D
40 47Right-handed alpha
Helix 34
30
D
67 83Right-handed alpha
Helix 35
31
D
97 110Right-handed alpha
Helix 36
34
G
24 34Right-handed alpha
Helix 37
36
G
39 41Right-handed alpha
Helix 38
37
G
57 60Right-handed alpha
Helix 39
38
H
251 259Right-handed alpha
Helix 40
39
H
262 267Right-handed alpha
Helix 41
40
H
305 308Right-handed 310
Helix 42
41
H
315 330Right-handed alpha
Helix 43
42
H
335 351Right-handed alpha
Helix 44
43
H
355 371Right-handed alpha
Helix 45
44
H
377 394Right-handed alpha
Helix 46
45
H
408 427Right-handed alpha
Helix 47
46
H
436 454Right-handed alpha
Helix 48
47
H
459 475Right-handed alpha
Helix 49
48
H
485 490Right-handed alpha
Helix 50
49
H
492 495Right-handed alpha
Helix 51
50
H
508 517Right-handed alpha
Helix 52
51
H
531 538Right-handed alpha
Helix 53
53
H
541 551Right-handed alpha
Helix 54
55
H
580 583Right-handed alpha
Helix 55
56
H
586 597Right-handed alpha
Helix 56
57
H
607 615Right-handed alpha
Helix 57
22
H
4 13Right-handed alpha
Helix 58
23
H
16 22Right-handed alpha
Helix 59
24
H
31 35Right-handed alpha
Helix 60
25
H
39 41Right-handed alpha
Helix 61
26
H
44 50Right-handed alpha
Helix 62
27
H
54 63Right-handed alpha
Helix 63
28
H
86 92Right-handed alpha
Helix 64
29
H
96 104Right-handed alpha
Helix 65
30
H
119 126Right-handed alpha
Helix 66
31
H
129 137Right-handed alpha
Helix 67
32
H
152 158Right-handed alpha
Helix 68
33
H
162 170Right-handed alpha
Helix 69
34
H
185 192Right-handed alpha
Helix 70
35
H
195 204Right-handed alpha
Helix 71
36
H
217 224Right-handed alpha
Helix 72
37
H
227 235Right-handed alpha
Helix 73
47
A
538 547Right-handed alpha
Helix 74
48
A
614 618Right-handed alpha
Helix 75
67
R
54 57Right-handed alpha
Helix 76
68
R
81 90Right-handed alpha
Helix 77
69
U
23 34Right-handed alpha
Helix 78
70
U
38 40Right-handed alpha
Helix 79
71
U
56 59Right-handed alpha
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There are 22 sheets in PDB entry 8Q7R. Click on sheet of interest to get list of strands forming it: 9, 10, 11, 12, 13, 14, 15, 20, 22, A, B, 23, 24, 8, 1, 2, 3, 4, 6, 7, 25, 26,

There are 1 strands in 9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 46first strand
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There are 1 strands in 10 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 64first strand
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There are 1 strands in 11 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
74 78first strand
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There are 1 strands in 12 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
2 6first strand
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There are 1 strands in 13 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
12 16first strand
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There are 1 strands in 14 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
42 44first strand
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There are 1 strands in 15 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
66 70first strand
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There are 1 strands in 20 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 512first strand
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There are 1 strands in 22 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 556first strand
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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
561 566first strand
Strand 2
A
573 578anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 594first strand
Strand 2
A
637 640anti-parallel
Strand 3
A
623 625anti-parallel
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There are 1 strands in 23 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
70 72first strand
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There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
78 80first strand
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There are 1 strands in 8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 32first strand
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There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
42 45first strand
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There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
73 79first strand
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There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 8first strand
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There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
12 19first strand
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There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
18 23first strand
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There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 62first strand
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There are 1 strands in 25 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 32first strand
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There are 1 strands in 26 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
27 34first strand
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