Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q91

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8Q91 entry

There are 14 chains in PDB entry 8Q91 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	LYS 62	GLY 233
A	LYS 58	TYR 1754
5	A 3	A 117
E	GLU 95	VAL 163
D	LYS 243	GLN 311
C	MET 105	LYS 951
B	PRO 36	GLN 62
m	LEU 3	VAL 75
n	LYS 3	VAL 76
i	LYS 2	ASP 82
j	GLU 10	ALA 116
k	MET 1	LYS 84
h	SER 6	LYS 88
l	MET 14	VAL 90

There are128 helices in PDB entry 8Q91. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	67	72	Right-handed alpha
Helix 2	AA2	F	92	99	Right-handed alpha
Helix 3	AA3	F	117	122	Right-handed alpha
Helix 4	AA4	F	153	164	Right-handed alpha
Helix 5	AA5	F	170	179	Right-handed alpha
Helix 6	AA6	F	196	212	Right-handed alpha
Helix 7	AA7	F	216	220	Right-handed 310
Helix 8	AA8	F	221	233	Right-handed alpha
Helix 9	AA9	A	62	72	Right-handed alpha
Helix 10	AB1	A	86	92	Right-handed alpha
Helix 11	AB2	A	94	105	Right-handed alpha
Helix 12	AB3	A	136	156	Right-handed alpha
Helix 13	AB4	A	177	182	Right-handed alpha
Helix 14	AB5	A	200	204	Right-handed 310
Helix 15	AB6	A	231	242	Right-handed alpha
Helix 16	AB7	A	243	246	Right-handed 310
Helix 17	AB8	A	259	269	Right-handed alpha
Helix 18	AB9	A	309	316	Right-handed alpha
Helix 19	AC1	A	398	404	Right-handed alpha
Helix 20	AC2	A	422	424	Right-handed 310
Helix 21	AC3	A	440	460	Right-handed alpha
Helix 22	AC4	A	471	479	Right-handed alpha
Helix 23	AC5	A	489	510	Right-handed alpha
Helix 24	AC6	A	533	538	Right-handed alpha
Helix 25	AC7	A	541	566	Right-handed alpha
Helix 26	AC8	A	570	584	Right-handed alpha
Helix 27	AC9	A	590	596	Right-handed 310
Helix 28	AD1	A	597	617	Right-handed alpha
Helix 29	AD2	A	632	656	Right-handed alpha
Helix 30	AD3	A	681	696	Right-handed alpha
Helix 31	AD4	A	704	722	Right-handed alpha
Helix 32	AD5	A	732	764	Right-handed alpha
Helix 33	AD6	A	768	798	Right-handed alpha
Helix 34	AD7	A	802	820	Right-handed alpha
Helix 35	AD8	A	834	850	Right-handed alpha
Helix 36	AD9	A	857	873	Right-handed alpha
Helix 37	AE1	A	873	888	Right-handed alpha
Helix 38	AE2	A	912	934	Right-handed alpha
Helix 39	AE3	A	947	961	Right-handed alpha
Helix 40	AE4	A	989	1001	Right-handed alpha
Helix 41	AE5	A	1002	1013	Right-handed alpha
Helix 42	AE6	A	1036	1054	Right-handed alpha
Helix 43	AE7	A	1054	1063	Right-handed alpha
Helix 44	AE8	A	1076	1081	Right-handed alpha
Helix 45	AE9	A	1102	1117	Right-handed alpha
Helix 46	AF1	A	1135	1139	Right-handed 310
Helix 47	AF2	A	1143	1161	Right-handed alpha
Helix 48	AF3	A	1169	1173	Right-handed 310
Helix 49	AF4	A	1233	1250	Right-handed alpha
Helix 50	AF5	A	1255	1274	Right-handed alpha
Helix 51	AF6	A	1274	1281	Right-handed alpha
Helix 52	AF7	A	1281	1304	Right-handed alpha
Helix 53	AF8	A	1313	1318	Right-handed alpha
Helix 54	AF9	A	1319	1323	Right-handed 310
Helix 55	AG1	A	1336	1341	Right-handed 310
Helix 56	AG2	A	1367	1372	Right-handed 310
Helix 57	AG3	A	1374	1400	Right-handed alpha
Helix 58	AG4	A	1408	1412	Right-handed 310
Helix 59	AG5	A	1418	1424	Right-handed 310
Helix 60	AG6	A	1426	1431	Right-handed alpha
Helix 61	AG7	A	1435	1444	Right-handed alpha
Helix 62	AG8	A	1457	1462	Right-handed alpha
Helix 63	AG9	A	1467	1479	Right-handed alpha
Helix 64	AH1	A	1479	1487	Right-handed alpha
Helix 65	AH2	A	1489	1493	Right-handed 310
Helix 66	AH3	A	1531	1538	Right-handed alpha
Helix 67	AH4	A	1539	1542	Right-handed 310
Helix 68	AH5	A	1566	1577	Right-handed alpha
Helix 69	AH6	A	1580	1600	Right-handed alpha
Helix 70	AH7	A	1601	1605	Right-handed 310
Helix 71	AH8	A	1617	1621	Right-handed 310
Helix 72	AH9	A	1675	1689	Right-handed alpha
Helix 73	AI1	A	1721	1737	Right-handed alpha
Helix 74	AI2	A	1737	1752	Right-handed alpha
Helix 75	AI3	E	96	114	Right-handed alpha
Helix 76	AI4	E	116	127	Right-handed alpha
Helix 77	AI5	E	138	150	Right-handed alpha
Helix 78	AI6	E	153	157	Right-handed 310
Helix 79	AI7	D	244	255	Right-handed alpha
Helix 80	AI8	D	277	281	Right-handed 310
Helix 81	AI9	D	287	291	Right-handed 310
Helix 82	AJ1	D	297	301	Right-handed 310
Helix 83	AJ2	C	115	123	Right-handed alpha
Helix 84	AJ3	C	125	127	Right-handed 310
Helix 85	AJ4	C	141	151	Right-handed alpha
Helix 86	AJ5	C	152	154	Right-handed 310
Helix 87	AJ6	C	171	178	Right-handed alpha
Helix 88	AJ7	C	208	210	Right-handed 310
Helix 89	AJ8	C	211	221	Right-handed alpha
Helix 90	AJ9	C	236	249	Right-handed alpha
Helix 91	AK1	C	260	265	Right-handed alpha
Helix 92	AK2	C	270	293	Right-handed alpha
Helix 93	AK3	C	301	305	Right-handed 310
Helix 94	AK4	C	312	315	Right-handed 310
Helix 95	AK5	C	319	331	Right-handed alpha
Helix 96	AK6	C	335	341	Right-handed alpha
Helix 97	AK7	C	367	373	Right-handed alpha
Helix 98	AK8	C	373	387	Right-handed alpha
Helix 99	AK9	C	391	400	Right-handed alpha
Helix 100	AL1	C	404	409	Right-handed alpha
Helix 101	AL2	C	411	425	Right-handed alpha
Helix 102	AL3	C	427	437	Right-handed alpha
Helix 103	AL4	C	440	453	Right-handed alpha
Helix 104	AL5	C	459	468	Right-handed alpha
Helix 105	AL6	C	596	598	Right-handed 310
Helix 106	AL7	C	599	614	Right-handed alpha
Helix 107	AL8	C	633	647	Right-handed alpha
Helix 108	AL9	C	695	702	Right-handed alpha
Helix 109	AM1	C	710	723	Right-handed alpha
Helix 110	AM2	C	725	730	Right-handed alpha
Helix 111	AM3	C	755	777	Right-handed alpha
Helix 112	AM4	C	807	823	Right-handed alpha
Helix 113	AM5	C	842	852	Right-handed alpha
Helix 114	AM6	C	878	881	Right-handed 310
Helix 115	AM7	C	882	891	Right-handed alpha
Helix 116	AM8	C	925	927	Right-handed 310
Helix 117	AM9	C	928	942	Right-handed alpha
Helix 118	AN1	m	6	14	Right-handed alpha
Helix 119	AN2	n	9	13	Right-handed 310
Helix 120	AN3	n	64	67	Right-handed 310
Helix 121	AN4	i	3	9	Right-handed alpha
Helix 122	AN5	i	75	80	Right-handed alpha
Helix 123	AN6	j	18	23	Right-handed alpha
Helix 124	AN7	j	29	39	Right-handed alpha
Helix 125	AN8	k	4	13	Right-handed alpha
Helix 126	AN9	k	74	84	Right-handed 310
Helix 127	AO1	h	7	11	Right-handed alpha
Helix 128	AO2	l	16	28	Right-handed alpha

There are 20 sheets in PDB entry 8Q91. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	129	first strand
Strand 2	A	115	121	anti-parallel
Strand 3	A	482	488	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	419	420	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	415	416	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	516	518	first strand
Strand 2	A	524	526	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	904	910	first strand
Strand 2	A	894	901	anti-parallel
Strand 3	A	1016	1019	parallel
Strand 4	A	1022	1025	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1085	1090	first strand
Strand 2	A	1095	1101	anti-parallel
Strand 3	A	973	979	anti-parallel
Strand 4	A	1174	1178	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1185	1189	first strand
Strand 2	A	1192	1198	anti-parallel
Strand 3	A	1224	1232	anti-parallel
Strand 4	A	1213	1217	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1342	1346	first strand
Strand 2	A	1349	1353	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1553	1554	first strand
Strand 2	A	1561	1562	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1608	1611	first strand
Strand 2	A	1629	1640	anti-parallel
Strand 3	A	1652	1667	anti-parallel
Strand 4	A	1700	1706	parallel
Strand 5	A	1711	1714	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	191	first strand
Strand 2	C	197	204	anti-parallel
Strand 3	C	129	136	parallel
Strand 4	C	224	230	parallel
Strand 5	C	252	258	parallel
Strand 6	C	307	311	parallel
Strand 7	C	316	318	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	350	first strand
Strand 2	C	355	357	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	523	526	first strand
Strand 2	C	506	510	anti-parallel
Strand 3	C	563	566	anti-parallel
Strand 4	C	475	483	anti-parallel
Strand 5	C	490	498	anti-parallel
Strand 6	C	549	552	anti-parallel
Strand 7	C	530	533	anti-parallel
Strand 8	C	538	541	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	501	502	first strand
Strand 2	C	543	544	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	618	621	first strand
Strand 2	C	627	631	anti-parallel
Strand 3	C	588	594	anti-parallel
Strand 4	C	653	655	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	618	621	first strand
Strand 2	C	627	631	anti-parallel
Strand 3	C	588	594	anti-parallel
Strand 4	C	659	660	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	783	784	first strand
Strand 2	C	663	666	parallel
Strand 3	C	825	839	anti-parallel
Strand 4	C	868	876	anti-parallel
Strand 5	C	856	862	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	783	784	first strand
Strand 2	C	663	666	parallel
Strand 3	C	825	839	anti-parallel
Strand 4	C	896	906	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	674	677	first strand
Strand 2	C	684	691	anti-parallel
Strand 3	C	787	795	anti-parallel
Strand 4	C	744	747	parallel
Strand 5	C	732	734	anti-parallel

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There are 36 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	m	18	23	first strand
Strand 2	m	27	36	anti-parallel
Strand 3	m	42	51	anti-parallel
Strand 4	m	54	64	anti-parallel
Strand 5	j	106	111	anti-parallel
Strand 6	j	42	46	anti-parallel
Strand 7	j	50	58	anti-parallel
Strand 8	j	66	76	anti-parallel
Strand 9	j	90	101	anti-parallel
Strand 10	i	65	70	anti-parallel
Strand 11	i	13	19	anti-parallel
Strand 12	i	24	32	anti-parallel
Strand 13	i	38	46	anti-parallel
Strand 14	i	53	60	anti-parallel
Strand 15	h	77	84	anti-parallel
Strand 16	h	16	21	anti-parallel
Strand 17	h	26	34	anti-parallel
Strand 18	h	40	49	anti-parallel
Strand 19	h	63	72	anti-parallel
Strand 20	k	68	73	anti-parallel
Strand 21	k	17	22	anti-parallel
Strand 22	k	27	35	anti-parallel
Strand 23	k	41	49	anti-parallel
Strand 24	k	55	63	anti-parallel
Strand 25	n	69	72	anti-parallel
Strand 26	n	16	20	anti-parallel
Strand 27	n	26	33	anti-parallel
Strand 28	n	40	46	anti-parallel
Strand 29	n	60	62	anti-parallel
Strand 30	l	84	88	anti-parallel
Strand 31	l	30	35	anti-parallel
Strand 32	l	42	49	anti-parallel
Strand 33	l	56	64	anti-parallel
Strand 34	l	72	79	anti-parallel
Strand 35	m	69	73	anti-parallel
Strand 36	m	18	23	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8Q91

Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q91