Analysis of interatomic Contacts of Structural Units in PDB entry:
8Q9F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8Q9F entry

There are 6 chains in PDB entry 8Q9F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 VAL 309THR 377
c
 VAL 309THR 377
A
 VAL 309THR 377
C
 VAL 309THR 377
D
 VAL 309THR 377
E
 VAL 309THR 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8Q9F

There are 16 sheets in PDB entry 8Q9F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
313 314first strand
Strand 2
B
313 314parallel
Strand 3
A
313 314parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
317 322first strand
Strand 2
B
317 322parallel
Strand 3
A
317 322parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
325 330first strand
Strand 2
B
325 330parallel
Strand 3
A
325 330parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
336 342first strand
Strand 2
B
336 342parallel
Strand 3
A
336 342parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
345 346first strand
Strand 2
B
345 346parallel
Strand 3
A
345 346parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
350 357first strand
Strand 2
B
350 357parallel
Strand 3
A
350 357parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
360 362first strand
Strand 2
B
360 362parallel
Strand 3
A
360 362parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
369 376first strand
Strand 2
B
369 376parallel
Strand 3
A
369 376parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
313 314first strand
Strand 2
C
313 314parallel
Strand 3
E
313 314parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
317 330first strand
Strand 2
C
317 330parallel
Strand 3
E
317 330parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
337 342first strand
Strand 2
C
337 342parallel
Strand 3
E
337 342parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
345 346first strand
Strand 2
C
345 346parallel
Strand 3
E
345 346parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
350 357first strand
Strand 2
C
350 357parallel
Strand 3
E
350 357parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
360 362first strand
Strand 2
C
360 362parallel
Strand 3
E
360 362parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
365 366first strand
Strand 2
C
365 366parallel
Strand 3
E
365 366parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
369 376first strand
Strand 2
C
369 376parallel
Strand 3
E
369 376parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il