Analysis of interatomic Contacts of Structural Units in PDB entry:
8QA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QA6 entry

There are 2 chains in PDB entry 8QA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 44ASN 644
B
 ARG 44ASN 644
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 8QA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 54Right-handed alpha
Helix 2
AA2
A
69 85Right-handed alpha
Helix 3
AA3
A
96 100Right-handed 310
Helix 4
AA4
A
108 119Right-handed alpha
Helix 5
AA5
A
134 149Right-handed alpha
Helix 6
AA6
A
174 187Right-handed alpha
Helix 7
AA7
A
206 221Right-handed alpha
Helix 8
AA8
A
232 247Right-handed alpha
Helix 9
AA9
A
261 271Right-handed alpha
Helix 10
AB1
A
277 288Right-handed alpha
Helix 11
AB2
A
290 313Right-handed alpha
Helix 12
AB3
A
325 337Right-handed alpha
Helix 13
AB4
A
399 407Right-handed 310
Helix 14
AB5
A
413 421Right-handed alpha
Helix 15
AB6
A
427 441Right-handed alpha
Helix 16
AB7
A
463 466Right-handed 310
Helix 17
AB8
A
467 477Right-handed alpha
Helix 18
AB9
A
518 530Right-handed alpha
Helix 19
AC1
A
531 533Right-handed 310
Helix 20
AC2
A
576 595Right-handed alpha
Helix 21
AC3
A
596 599Right-handed 310
Helix 22
AC4
A
603 616Right-handed alpha
Helix 23
AC5
A
631 644Right-handed alpha
Helix 24
AC6
B
45 54Right-handed alpha
Helix 25
AC7
B
69 85Right-handed alpha
Helix 26
AC8
B
96 100Right-handed 310
Helix 27
AC9
B
108 119Right-handed alpha
Helix 28
AD1
B
134 149Right-handed alpha
Helix 29
AD2
B
174 187Right-handed alpha
Helix 30
AD3
B
206 221Right-handed alpha
Helix 31
AD4
B
232 247Right-handed alpha
Helix 32
AD5
B
261 271Right-handed alpha
Helix 33
AD6
B
277 288Right-handed alpha
Helix 34
AD7
B
290 313Right-handed alpha
Helix 35
AD8
B
325 337Right-handed alpha
Helix 36
AD9
B
399 407Right-handed 310
Helix 37
AE1
B
413 421Right-handed alpha
Helix 38
AE2
B
427 441Right-handed alpha
Helix 39
AE3
B
463 466Right-handed 310
Helix 40
AE4
B
467 477Right-handed alpha
Helix 41
AE5
B
518 530Right-handed alpha
Helix 42
AE6
B
531 533Right-handed 310
Helix 43
AE7
B
576 595Right-handed alpha
Helix 44
AE8
B
596 599Right-handed 310
Helix 45
AE9
B
603 616Right-handed alpha
Helix 46
AF1
B
631 644Right-handed alpha
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There are 6 sheets in PDB entry 8QA6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
91 93parallel
Strand 3
A
124 128parallel
Strand 4
A
152 155parallel
Strand 5
A
191 196parallel
Strand 6
A
224 227parallel
Strand 7
A
252 256parallel
Strand 8
A
317 321parallel
Strand 9
A
59 64parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 485first strand
Strand 2
A
512 517anti-parallel
Strand 3
A
617 623anti-parallel
Strand 4
A
536 541anti-parallel
Strand 5
A
547 549anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 509first strand
Strand 2
A
557 563anti-parallel
Strand 3
A
570 575anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
91 93parallel
Strand 3
B
124 128parallel
Strand 4
B
152 155parallel
Strand 5
B
191 196parallel
Strand 6
B
224 227parallel
Strand 7
B
252 256parallel
Strand 8
B
317 321parallel
Strand 9
B
59 64parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
480 485first strand
Strand 2
B
512 517anti-parallel
Strand 3
B
617 623anti-parallel
Strand 4
B
536 541anti-parallel
Strand 5
B
547 549anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
506 509first strand
Strand 2
B
557 563anti-parallel
Strand 3
B
570 575anti-parallel
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