Analysis of interatomic Contacts of Structural Units in PDB entry:
8QAG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QAG entry

There are 2 chains in PDB entry 8QAG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1ALA 309
B
 ALA 3ILE 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8QAG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 26Right-handed alpha
Helix 2
AA2
A
27 54Right-handed alpha
Helix 3
AA3
A
59 83Right-handed alpha
Helix 4
AA4
A
84 112Right-handed alpha
Helix 5
AA5
A
114 140Right-handed alpha
Helix 6
AA6
A
141 168Right-handed alpha
Helix 7
AA7
A
171 197Right-handed alpha
Helix 8
AA8
A
198 225Right-handed alpha
Helix 9
AA9
A
229 253Right-handed alpha
Helix 10
AB1
A
255 284Right-handed alpha
Helix 11
AB2
A
285 309Right-handed alpha
Helix 12
AB3
B
4 26Right-handed alpha
Helix 13
AB4
B
27 52Right-handed alpha
Helix 14
AB5
B
62 63Right-handed 310
Helix 15
AB6
B
65 65Right-handed 310
Helix 16
AB7
B
66 83Right-handed alpha
Helix 17
AB8
B
84 99Right-handed alpha
Helix 18
AB9
B
102 107Right-handed alpha
Helix 19
AC1
B
117 140Right-handed alpha
Helix 20
AC2
B
141 168Right-handed alpha
Helix 21
AC3
B
171 197Right-handed alpha
Helix 22
AC4
B
198 224Right-handed alpha
Helix 23
AC5
B
229 254Right-handed alpha
Helix 24
AC6
B
255 282Right-handed alpha
Helix 25
AC7
B
285 308Right-handed alpha
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There are no sheets in PDB entry 8QAG
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