Analysis of interatomic Contacts of Structural Units in PDB entry:
8QB6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QB6 entry

There is 1 chain in PDB entry 8QB6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2LEU 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8QB6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 31Right-handed alpha
Helix 2
AA2
A
66 80Right-handed alpha
Helix 3
AA3
A
94 105Right-handed alpha
Helix 4
AA4
A
105 113Right-handed alpha
Helix 5
AA5
A
126 144Right-handed alpha
Helix 6
AA6
A
146 150Right-handed 310
Helix 7
AA7
A
168 186Right-handed alpha
Helix 8
AA8
A
198 203Right-handed alpha
Helix 9
AA9
A
227 234Right-handed alpha
Helix 10
AB1
A
255 270Right-handed alpha
Helix 11
AB2
A
306 324Right-handed alpha
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There are 2 sheets in PDB entry 8QB6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
290 297parallel
Strand 3
A
238 240parallel
Strand 4
A
210 213parallel
Strand 5
A
189 193parallel
Strand 6
A
154 158parallel
Strand 7
A
83 90parallel
Strand 8
A
35 41parallel
Strand 9
A
4 10parallel
Strand 10
A
290 297parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
280 284anti-parallel
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