Analysis of interatomic Contacts of Structural Units in PDB entry:
8QCY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QCY entry

There is 1 chain in PDB entry 8QCY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 77THR 500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8QCY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 108Right-handed alpha
Helix 2
AA2
A
108 117Right-handed alpha
Helix 3
AA3
A
119 149Right-handed alpha
Helix 4
AA4
A
149 167Right-handed alpha
Helix 5
AA5
A
168 171Right-handed 310
Helix 6
AA6
A
176 193Right-handed alpha
Helix 7
AA7
A
197 206Right-handed alpha
Helix 8
AA8
A
210 232Right-handed alpha
Helix 9
AA9
A
232 237Right-handed alpha
Helix 10
AB1
A
242 271Right-handed alpha
Helix 11
AB2
A
281 291Right-handed alpha
Helix 12
AB3
A
296 307Right-handed alpha
Helix 13
AB4
A
307 339Right-handed alpha
Helix 14
AB5
A
342 372Right-handed alpha
Helix 15
AB6
A
373 396Right-handed alpha
Helix 16
AB7
A
397 399Right-handed 310
Helix 17
AB8
A
400 430Right-handed alpha
Helix 18
AB9
A
434 465Right-handed alpha
Helix 19
AC1
A
465 486Right-handed alpha
Helix 20
AC2
A
491 500Right-handed alpha
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There are no sheets in PDB entry 8QCY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il