Analysis of interatomic Contacts of Structural Units in PDB entry:
8QCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QCZ entry

There is 1 chain in PDB entry 8QCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 77THR 500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 8QCZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
83 108Right-handed alpha
Helix 2
AA2
A
108 117Right-handed alpha
Helix 3
AA3
A
119 149Right-handed alpha
Helix 4
AA4
A
149 170Right-handed alpha
Helix 5
AA5
A
176 193Right-handed alpha
Helix 6
AA6
A
197 206Right-handed alpha
Helix 7
AA7
A
207 209Right-handed 310
Helix 8
AA8
A
210 232Right-handed alpha
Helix 9
AA9
A
232 237Right-handed alpha
Helix 10
AB1
A
242 272Right-handed alpha
Helix 11
AB2
A
281 290Right-handed alpha
Helix 12
AB3
A
296 307Right-handed alpha
Helix 13
AB4
A
307 339Right-handed alpha
Helix 14
AB5
A
342 372Right-handed alpha
Helix 15
AB6
A
373 396Right-handed alpha
Helix 16
AB7
A
400 431Right-handed alpha
Helix 17
AB8
A
434 464Right-handed alpha
Helix 18
AB9
A
465 486Right-handed alpha
Helix 19
AC1
A
491 498Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8QCZ

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il