Analysis of interatomic Contacts of Structural Units in PDB entry:
8QHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QHE entry

There is 1 chain in PDB entry 8QHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8QHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
33 36Right-handed 310
Helix 3
AA3
A
37 43Right-handed alpha
Helix 4
AA4
A
50 57Right-handed alpha
Helix 5
AA5
A
67 77Right-handed alpha
Helix 6
AA6
A
78 82Right-handed 310
Helix 7
AA7
A
94 108Right-handed alpha
Helix 8
AA8
A
120 124Right-handed 310
Helix 9
AA9
A
136 148Right-handed alpha
Helix 10
AB1
A
161 189Right-handed alpha
Helix 11
AB2
A
193 222Right-handed alpha
Helix 12
AB3
A
230 248Right-handed alpha
Helix 13
AB4
A
252 254Right-handed 310
Helix 14
AB5
A
255 268Right-handed alpha
Helix 15
AB6
A
274 282Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8QHE.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
26 30parallel
Strand 3
A
3 7parallel
Strand 4
A
60 63parallel
Strand 5
A
86 89parallel
Strand 6
A
111 118parallel
Strand 7
A
130 135anti-parallel
Strand 8
A
152 155parallel
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