Analysis of interatomic Contacts of Structural Units in PDB entry:
8QHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QHF entry

There is 1 chain in PDB entry 8QHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 30LEU 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8QHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 39Right-handed alpha
Helix 2
AA2
A
60 67Right-handed alpha
Helix 3
AA3
A
116 121Right-handed alpha
Helix 4
AA4
A
122 131Right-handed alpha
Helix 5
AA5
A
152 156Right-handed 310
Helix 6
AA6
A
160 167Right-handed alpha
Helix 7
AA7
A
169 178Right-handed alpha
Helix 8
AA8
A
190 202Right-handed alpha
Helix 9
AA9
A
220 233Right-handed alpha
Helix 10
AB1
A
237 243Right-handed alpha
Helix 11
AB2
A
247 253Right-handed alpha
Helix 12
AB3
A
258 263Right-handed 310
Helix 13
AB4
A
291 327Right-handed alpha
Helix 14
AB5
A
342 362Right-handed alpha
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There are 2 sheets in PDB entry 8QHF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 47first strand
Strand 2
A
71 78anti-parallel
Strand 3
A
83 90anti-parallel
Strand 4
A
133 137anti-parallel
Strand 5
A
101 105parallel
Strand 6
A
183 188parallel
Strand 7
A
208 212parallel
Strand 8
A
266 270parallel
Strand 9
A
332 334parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
339 341parallel
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