Analysis of interatomic Contacts of Structural Units in PDB entry:
8QLN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QLN entry

There is 1 chain in PDB entry 8QLN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5HIS 515
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8QLN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 19Right-handed alpha
Helix 2
AA2
A
22 36Right-handed alpha
Helix 3
AA3
A
41 43Right-handed 310
Helix 4
AA4
A
44 55Right-handed alpha
Helix 5
AA5
A
61 68Right-handed alpha
Helix 6
AA6
A
68 75Right-handed alpha
Helix 7
AA7
A
84 102Right-handed alpha
Helix 8
AA8
A
117 142Right-handed alpha
Helix 9
AA9
A
176 192Right-handed alpha
Helix 10
AB1
A
193 196Right-handed 310
Helix 11
AB2
A
198 217Right-handed alpha
Helix 12
AB3
A
221 226Right-handed alpha
Helix 13
AB4
A
231 246Right-handed alpha
Helix 14
AB5
A
247 251Right-handed 310
Helix 15
AB6
A
252 264Right-handed alpha
Helix 16
AB7
A
283 286Right-handed 310
Helix 17
AB8
A
287 297Right-handed alpha
Helix 18
AB9
A
315 323Right-handed alpha
Helix 19
AC1
A
324 330Right-handed 310
Helix 20
AC2
A
331 341Right-handed alpha
Helix 21
AC3
A
349 364Right-handed alpha
Helix 22
AC4
A
372 386Right-handed alpha
Helix 23
AC5
A
389 402Right-handed alpha
Helix 24
AC6
A
410 435Right-handed alpha
Helix 25
AC7
A
440 453Right-handed alpha
Helix 26
AC8
A
461 471Right-handed alpha
Helix 27
AC9
A
485 493Right-handed alpha
Helix 28
AD1
A
497 513Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8QLN.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
77 78parallel
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