Analysis of interatomic Contacts of Structural Units in PDB entry:
8QRW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QRW entry

There is 1 chain in PDB entry 8QRW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LEU 49ASP 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8QRW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
49 75Right-handed alpha
Helix 2
AA2
B
76 118Right-handed alpha
Helix 3
AA3
B
120 152Right-handed alpha
Helix 4
AA4
B
179 192Right-handed alpha
Helix 5
AA5
B
195 200Right-handed alpha
Helix 6
AA6
B
230 249Right-handed alpha
Helix 7
AA7
B
252 291Right-handed alpha
Helix 8
AA8
B
294 319Right-handed alpha
Helix 9
AA9
B
319 330Right-handed alpha
Helix 10
AB1
B
332 339Right-handed alpha
Helix 11
AB2
B
340 351Right-handed alpha
Helix 12
AB3
B
352 367Right-handed alpha
Helix 13
AB4
B
371 386Right-handed alpha
Helix 14
AB5
B
387 405Right-handed alpha
Helix 15
AB6
B
410 426Right-handed alpha
Helix 16
AB7
B
432 447Right-handed alpha
Helix 17
AB8
B
452 458Right-handed alpha
Helix 18
AB9
B
459 487Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8QRW.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 210first strand
Strand 2
B
219 227anti-parallel
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