Analysis of interatomic Contacts of Structural Units in PDB entry:
8QSN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QSN entry

There is 1 chain in PDB entry 8QSN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 28HIS 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8QSN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 57Right-handed alpha
Helix 2
AA2
A
57 65Right-handed alpha
Helix 3
AA3
A
70 98Right-handed alpha
Helix 4
AA4
A
102 118Right-handed alpha
Helix 5
AA5
A
156 183Right-handed alpha
Helix 6
AA6
A
187 218Right-handed alpha
Helix 7
AA7
A
221 246Right-handed alpha
Helix 8
AA8
A
256 273Right-handed alpha
Helix 9
AA9
A
297 305Right-handed alpha
Helix 10
AB1
A
308 347Right-handed alpha
Helix 11
AB2
A
348 349Right-handed 310
Helix 12
AB3
A
365 366Right-handed 310
Helix 13
AB4
A
367 396Right-handed alpha
Helix 14
AB5
A
400 431Right-handed alpha
Helix 15
AB6
A
450 453Right-handed 310
Helix 16
AB7
A
454 468Right-handed alpha
Helix 17
AB8
A
468 479Right-handed alpha
Helix 18
AB9
A
484 510Right-handed alpha
Helix 19
AC1
A
531 560Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8QSN.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 439first strand
Strand 2
A
442 446anti-parallel
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