Analysis of interatomic Contacts of Structural Units in PDB entry:
8QSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QSV entry

There is 1 chain in PDB entry 8QSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 72GLY 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8QSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
82 87Right-handed 310
Helix 2
AA2
A
89 107Right-handed alpha
Helix 3
AA3
A
139 151Right-handed alpha
Helix 4
AA4
A
152 154Right-handed 310
Helix 5
AA5
A
155 160Right-handed alpha
Helix 6
AA6
A
163 167Right-handed 310
Helix 7
AA7
A
250 255Right-handed alpha
Helix 8
AA8
A
269 276Right-handed alpha
Helix 9
AA9
A
317 324Right-handed alpha
Helix 10
AB1
A
331 336Right-handed 310
Helix 11
AB2
A
352 372Right-handed alpha
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There are 2 sheets in PDB entry 8QSV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 267first strand
Strand 2
A
111 115parallel
Strand 3
A
74 80parallel
Strand 4
A
306 310parallel
Strand 5
A
285 289parallel
Strand 6
A
338 341parallel
Strand 7
A
294 295parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 194first strand
Strand 2
A
206 208anti-parallel
Strand 3
A
215 216anti-parallel
Strand 4
A
242 247parallel
Strand 5
A
226 231anti-parallel
Strand 6
A
189 194anti-parallel
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