Analysis of interatomic Contacts of Structural Units in PDB entry:
8QSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QSZ entry

There are 16 chains in PDB entry 8QSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 5ASN 1458
B
GLU 10LYS 1210
C
THR 5ASP 264
E
GLU 4ALA 210
F
GLY 61ILE 142
G
MET 1GLU 72
H
MET 1ARG 125
I
PHE 4GLN 113
J
MET 1SER 66
K
MET 1GLU 116
L
THR 19ARG 63
Y
ARG 726ARG 797
N
A -17 G 22
P
A 1 U 10
T
C -21 T 18
X
LEU 481ARG 496
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are140 helices in PDB entry 8QSZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
25 33Right-handed alpha
Helix 2
AA2
A
57 61Right-handed 310
Helix 3
AA3
A
97 108Right-handed alpha
Helix 4
AA4
A
121 129Right-handed alpha
Helix 5
AA5
A
132 145Right-handed alpha
Helix 6
AA6
A
165 169Right-handed 310
Helix 7
AA7
A
209 219Right-handed alpha
Helix 8
AA8
A
221 229Right-handed alpha
Helix 9
AA9
A
236 239Right-handed 310
Helix 10
AB1
A
266 289Right-handed alpha
Helix 11
AB2
A
291 311Right-handed alpha
Helix 12
AB3
A
330 336Right-handed alpha
Helix 13
AB4
A
340 345Right-handed alpha
Helix 14
AB5
A
374 380Right-handed alpha
Helix 15
AB6
A
390 401Right-handed alpha
Helix 16
AB7
A
426 430Right-handed 310
Helix 17
AB8
A
457 459Right-handed 310
Helix 18
AB9
A
480 485Right-handed alpha
Helix 19
AC1
A
500 510Right-handed alpha
Helix 20
AC2
A
513 516Right-handed 310
Helix 21
AC3
A
531 541Right-handed alpha
Helix 22
AC4
A
548 556Right-handed alpha
Helix 23
AC5
A
557 559Right-handed 310
Helix 24
AC6
A
580 585Right-handed alpha
Helix 25
AC7
A
624 629Right-handed alpha
Helix 26
AC8
A
634 644Right-handed alpha
Helix 27
AC9
A
644 665Right-handed alpha
Helix 28
AD1
A
671 676Right-handed 310
Helix 29
AD2
A
678 704Right-handed alpha
Helix 30
AD3
A
715 743Right-handed alpha
Helix 31
AD4
A
747 756Right-handed alpha
Helix 32
AD5
A
760 769Right-handed alpha
Helix 33
AD6
A
815 852Right-handed alpha
Helix 34
AD7
A
873 877Right-handed 310
Helix 35
AD8
A
880 882Right-handed 310
Helix 36
AD9
A
889 894Right-handed alpha
Helix 37
AE1
A
895 904Right-handed alpha
Helix 38
AE2
A
911 916Right-handed alpha
Helix 39
AE3
A
924 948Right-handed alpha
Helix 40
AE4
A
962 974Right-handed alpha
Helix 41
AE5
A
985 999Right-handed alpha
Helix 42
AE6
A
1007 1018Right-handed alpha
Helix 43
AE7
A
1018 1029Right-handed alpha
Helix 44
AE8
A
1030 1037Right-handed alpha
Helix 45
AE9
A
1041 1060Right-handed alpha
Helix 46
AF1
A
1066 1080Right-handed alpha
Helix 47
AF2
A
1100 1110Right-handed alpha
Helix 48
AF3
A
1124 1129Right-handed alpha
Helix 49
AF4
A
1130 1142Right-handed alpha
Helix 50
AF5
A
1146 1149Right-handed alpha
Helix 51
AF6
A
1166 1168Right-handed 310
Helix 52
AF7
A
1169 1179Right-handed alpha
Helix 53
AF8
A
1181 1188Right-handed alpha
Helix 54
AF9
A
1189 1191Right-handed 310
Helix 55
AG1
A
1201 1209Right-handed alpha
Helix 56
AG2
A
1211 1224Right-handed alpha
Helix 57
AG3
A
1261 1276Right-handed alpha
Helix 58
AG4
A
1318 1325Right-handed alpha
Helix 59
AG5
A
1337 1346Right-handed alpha
Helix 60
AG6
A
1346 1364Right-handed alpha
Helix 61
AG7
A
1370 1383Right-handed alpha
Helix 62
AG8
A
1391 1398Right-handed alpha
Helix 63
AG9
A
1401 1407Right-handed alpha
Helix 64
AH1
A
1410 1421Right-handed alpha
Helix 65
AH2
A
1429 1436Right-handed alpha
Helix 66
AH3
A
1442 1445Right-handed 310
Helix 67
AH4
A
1452 1458Right-handed alpha
Helix 68
AH5
B
13 28Right-handed alpha
Helix 69
AH6
B
31 44Right-handed alpha
Helix 70
AH7
B
44 53Right-handed alpha
Helix 71
AH8
B
100 108Right-handed alpha
Helix 72
AH9
B
170 177Right-handed alpha
Helix 73
AI1
B
268 275Right-handed alpha
Helix 74
AI2
B
279 288Right-handed alpha
Helix 75
AI3
B
293 307Right-handed alpha
Helix 76
AI4
B
312 323Right-handed alpha
Helix 77
AI5
B
330 345Right-handed alpha
Helix 78
AI6
B
356 376Right-handed alpha
Helix 79
AI7
B
386 388Right-handed 310
Helix 80
AI8
B
394 425Right-handed alpha
Helix 81
AI9
B
429 434Right-handed alpha
Helix 82
AJ1
B
436 450Right-handed alpha
Helix 83
AJ2
B
454 458Right-handed 310
Helix 84
AJ3
B
473 481Right-handed alpha
Helix 85
AJ4
B
494 499Right-handed alpha
Helix 86
AJ5
B
501 505Right-handed 310
Helix 87
AJ6
B
537 547Right-handed alpha
Helix 88
AJ7
B
578 591Right-handed alpha
Helix 89
AJ8
B
641 654Right-handed alpha
Helix 90
AJ9
B
664 671Right-handed alpha
Helix 91
AK1
B
679 683Right-handed alpha
Helix 92
AK2
B
690 702Right-handed alpha
Helix 93
AK3
B
733 738Right-handed 310
Helix 94
AK4
B
747 751Right-handed 310
Helix 95
AK5
B
752 763Right-handed alpha
Helix 96
AK6
B
764 766Right-handed 310
Helix 97
AK7
B
797 802Right-handed alpha
Helix 98
AK8
B
832 837Right-handed alpha
Helix 99
AK9
B
984 988Right-handed 310
Helix 100
AL1
B
1004 1010Right-handed alpha
Helix 101
AL2
B
1011 1028Right-handed alpha
Helix 102
AL3
B
1040 1050Right-handed alpha
Helix 103
AL4
B
1087 1091Right-handed 310
Helix 104
AL5
B
1120 1131Right-handed alpha
Helix 105
AL6
B
1132 1141Right-handed alpha
Helix 106
AL7
B
1186 1197Right-handed alpha
Helix 107
AL8
C
25 39Right-handed alpha
Helix 108
AL9
C
58 69Right-handed alpha
Helix 109
AM1
C
120 122Right-handed 310
Helix 110
AM2
C
168 172Right-handed 310
Helix 111
AM3
C
197 202Right-handed alpha
Helix 112
AM4
C
205 211Right-handed 310
Helix 113
AM5
C
240 264Right-handed alpha
Helix 114
AM6
E
5 26Right-handed alpha
Helix 115
AM7
E
30 35Right-handed alpha
Helix 116
AM8
E
37 46Right-handed alpha
Helix 117
AM9
E
53 58Right-handed 310
Helix 118
AN1
E
83 98Right-handed alpha
Helix 119
AN2
E
111 121Right-handed alpha
Helix 120
AN3
E
132 137Right-handed alpha
Helix 121
AN4
E
138 142Right-handed 310
Helix 122
AN5
E
152 164Right-handed alpha
Helix 123
AN6
E
166 170Right-handed 310
Helix 124
AN7
E
177 184Right-handed alpha
Helix 125
AN8
F
76 93Right-handed alpha
Helix 126
AN9
F
106 117Right-handed alpha
Helix 127
AO1
G
15 19Right-handed 310
Helix 128
AO2
G
20 21Right-handed 310
Helix 129
AO3
G
22 34Right-handed alpha
Helix 130
AO4
H
65 72Right-handed alpha
Helix 131
AO5
H
108 112Right-handed alpha
Helix 132
AO6
J
17 27Right-handed alpha
Helix 133
AO7
J
30 38Right-handed alpha
Helix 134
AO8
J
42 51Right-handed alpha
Helix 135
AO9
J
54 60Right-handed alpha
Helix 136
AP1
K
5 10Right-handed 310
Helix 137
AP2
K
38 51Right-handed alpha
Helix 138
AP3
K
81 116Right-handed alpha
Helix 139
AP4
Y
785 795Right-handed alpha
Helix 140
AP5
X
482 491Right-handed alpha
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There are 45 sheets in PDB entry 8QSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1424 1425first strand
Strand 2
A
18 20anti-parallel
Strand 3
B
1203 1205anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
84 93first strand
Strand 2
A
241 247anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
181 185first strand
Strand 2
A
188 193anti-parallel
Strand 3
A
204 208anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
349 351first strand
Strand 2
B
1117 1119anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1093 1095first strand
Strand 2
A
354 361anti-parallel
Strand 3
A
492 496anti-parallel
Strand 4
A
447 451anti-parallel
Strand 5
A
461 469anti-parallel
Strand 6
A
369 373parallel
Strand 7
A
474 476anti-parallel
Strand 8
A
354 361parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
381 385first strand
Strand 2
A
437 441anti-parallel
Strand 3
A
408 412anti-parallel
Strand 4
A
418 420anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
518 519first strand
Strand 2
A
524 525anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
546 547first strand
Strand 2
A
578 579anti-parallel
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There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
571 573first strand
Strand 2
H
74 85anti-parallel
Strand 3
H
118 124anti-parallel
Strand 4
H
54 60anti-parallel
Strand 5
H
5 17anti-parallel
Strand 6
H
25 31anti-parallel
Strand 7
H
37 42anti-parallel
Strand 8
H
100 107anti-parallel
Strand 9
H
90 97anti-parallel
Strand 10
H
74 85anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
594 596first strand
Strand 2
A
611 614anti-parallel
Strand 3
A
617 620anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
772 773first strand
Strand 2
A
805 806anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
855 856first strand
Strand 2
A
862 863anti-parallel
Strand 3
A
869 871anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
884 888first strand
Strand 2
A
956 960anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1287 1298first strand
Strand 2
A
1304 1315anti-parallel
Strand 3
A
1119 1122anti-parallel
Strand 4
A
1334 1335anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1144 1145first strand
Strand 2
A
1278 1280anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1227 1231first strand
Strand 2
A
1239 1245anti-parallel
Strand 3
A
1194 1200anti-parallel
Strand 4
A
1150 1157anti-parallel
Strand 5
I
44 47anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1447 1451first strand
Strand 2
F
122 127anti-parallel
Strand 3
F
133 137anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
55 60first strand
Strand 2
B
73 84anti-parallel
Strand 3
B
112 126anti-parallel
Strand 4
B
138 143anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
55 60first strand
Strand 2
B
73 84anti-parallel
Strand 3
B
112 126anti-parallel
Strand 4
B
148 156anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
88 90first strand
Strand 2
B
96 98anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
188 190first strand
Strand 2
B
193 197anti-parallel
Strand 3
B
466 468anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
390 393first strand
Strand 2
B
199 203anti-parallel
Strand 3
B
483 485parallel
Strand 4
B
522 524anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
208 212first strand
Strand 2
B
219 227anti-parallel
Strand 3
B
237 244anti-parallel
Strand 4
B
255 258anti-parallel
Strand 5
B
266 267anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
530 531first strand
Strand 2
B
619 625anti-parallel
Strand 3
B
674 678anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
530 531first strand
Strand 2
B
619 625anti-parallel
Strand 3
B
729 730anti-parallel
Strand 4
B
687 688parallel
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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
550 551first strand
Strand 2
B
571 576anti-parallel
Strand 3
B
564 568anti-parallel
Strand 4
B
609 613parallel
Strand 5
B
600 604anti-parallel
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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
781 785first strand
Strand 2
B
842 851anti-parallel
Strand 3
B
951 961anti-parallel
Strand 4
B
935 945anti-parallel
Strand 5
B
893 895anti-parallel
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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
781 785first strand
Strand 2
B
842 851anti-parallel
Strand 3
B
951 961anti-parallel
Strand 4
B
935 945anti-parallel
Strand 5
L
48 50anti-parallel
Strand 6
L
20 24anti-parallel
Strand 7
L
30 33anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
793 794first strand
Strand 2
B
1031 1032parallel
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There are 8 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1058 1059first strand
Strand 2
B
1074 1083anti-parallel
Strand 3
B
968 971anti-parallel
Strand 4
B
976 983anti-parallel
Strand 5
B
827 831parallel
Strand 6
B
999 1001anti-parallel
Strand 7
B
810 816parallel
Strand 8
B
1074 1083anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
862 863first strand
Strand 2
B
903 906anti-parallel
Strand 3
B
923 925anti-parallel
Strand 4
B
871 872parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
899 901first strand
Strand 2
B
928 929anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
990 991first strand
Strand 2
B
1061 1062anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1146 1152first strand
Strand 2
B
1179 1185anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1160 1162first strand
Strand 2
B
1167 1169anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
6 12first strand
Strand 2
C
16 22anti-parallel
Strand 3
C
228 235anti-parallel
Strand 4
C
174 181anti-parallel
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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
123 124first strand
Strand 2
C
101 108anti-parallel
Strand 3
C
153 163anti-parallel
Strand 4
C
42 53anti-parallel
Strand 5
L
59 61anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
114 118first strand
Strand 2
C
144 149anti-parallel
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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
59 61first strand
Strand 2
E
72 76anti-parallel
Strand 3
E
101 106parallel
Strand 4
E
126 131parallel
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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
147 150first strand
Strand 2
E
190 197anti-parallel
Strand 3
E
201 210anti-parallel
Strand 4
E
172 174parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
12 14first strand
Strand 2
G
69 71anti-parallel
Strand 3
G
61 62anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
14 19first strand
Strand 2
I
24 29anti-parallel
Strand 3
I
35 37anti-parallel
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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
70 71first strand
Strand 2
I
83 87anti-parallel
Strand 3
I
99 103anti-parallel
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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
18 23first strand
Strand 2
K
29 35anti-parallel
Strand 3
K
69 76anti-parallel
Strand 4
K
55 61anti-parallel
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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
766 770first strand
Strand 2
Y
755 760anti-parallel
Strand 3
Y
745 751anti-parallel
Strand 4
Y
733 736anti-parallel
Strand 5
Y
774 777anti-parallel
Strand 6
Y
783 784anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il