Analysis of interatomic Contacts of Structural Units in PDB entry:
8QT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QT5 entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 8QT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ASN 1172
A
 ALA 1174PRO 1175
B
 THR 4ASN 1172
B
 ALA 1174PRO 1175
C
 THR 4SER 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 8QT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 20Right-handed alpha
Helix 2
AA2
A
22 38Right-handed alpha
Helix 3
AA3
A
44 79Right-handed alpha
Helix 4
AA4
A
81 113Right-handed alpha
Helix 5
AA5
A
113 118Right-handed alpha
Helix 6
AA6
A
120 142Right-handed alpha
Helix 7
AA7
A
145 169Right-handed alpha
Helix 8
AA8
A
173 190Right-handed alpha
Helix 9
AA9
A
193 211Right-handed alpha
Helix 10
AB1
A
219 240Right-handed alpha
Helix 11
AB2
B
6 20Right-handed alpha
Helix 12
AB3
B
22 38Right-handed alpha
Helix 13
AB4
B
44 80Right-handed alpha
Helix 14
AB5
B
82 113Right-handed alpha
Helix 15
AB6
B
113 118Right-handed alpha
Helix 16
AB7
B
120 142Right-handed alpha
Helix 17
AB8
B
143 169Right-handed alpha
Helix 18
AB9
B
173 190Right-handed alpha
Helix 19
AC1
B
193 213Right-handed alpha
Helix 20
AC2
B
219 241Right-handed alpha
Helix 21
AC3
C
6 21Right-handed alpha
Helix 22
AC4
C
22 38Right-handed alpha
Helix 23
AC5
C
44 78Right-handed alpha
Helix 24
AC6
C
81 113Right-handed alpha
Helix 25
AC7
C
113 118Right-handed alpha
Helix 26
AC8
C
120 142Right-handed alpha
Helix 27
AC9
C
144 169Right-handed alpha
Helix 28
AD1
C
173 190Right-handed alpha
Helix 29
AD2
C
193 211Right-handed alpha
Helix 30
AD3
C
216 242Right-handed alpha
Helix 31
AD4
D
6 21Right-handed alpha
Helix 32
AD5
D
22 38Right-handed alpha
Helix 33
AD6
D
44 80Right-handed alpha
Helix 34
AD7
D
81 113Right-handed alpha
Helix 35
AD8
D
113 118Right-handed alpha
Helix 36
AD9
D
120 142Right-handed alpha
Helix 37
AE1
D
144 169Right-handed alpha
Helix 38
AE2
D
173 190Right-handed alpha
Helix 39
AE3
D
193 211Right-handed alpha
Helix 40
AE4
D
216 244Right-handed alpha
Helix 41
AE5
E
6 20Right-handed alpha
Helix 42
AE6
E
22 38Right-handed alpha
Helix 43
AE7
E
44 80Right-handed alpha
Helix 44
AE8
E
81 113Right-handed alpha
Helix 45
AE9
E
113 118Right-handed alpha
Helix 46
AF1
E
120 142Right-handed alpha
Helix 47
AF2
E
143 169Right-handed alpha
Helix 48
AF3
E
173 190Right-handed alpha
Helix 49
AF4
E
193 211Right-handed alpha
Helix 50
AF5
E
212 215Right-handed 310
Helix 51
AF6
E
219 243Right-handed alpha
Helix 52
AF7
F
6 21Right-handed alpha
Helix 53
AF8
F
22 38Right-handed alpha
Helix 54
AF9
F
44 78Right-handed alpha
Helix 55
AG1
F
81 113Right-handed alpha
Helix 56
AG2
F
113 118Right-handed alpha
Helix 57
AG3
F
120 142Right-handed alpha
Helix 58
AG4
F
143 169Right-handed alpha
Helix 59
AG5
F
173 190Right-handed alpha
Helix 60
AG6
F
193 211Right-handed alpha
Helix 61
AG7
F
216 238Right-handed alpha
Helix 62
AG8
G
6 20Right-handed alpha
Helix 63
AG9
G
22 38Right-handed alpha
Helix 64
AH1
G
44 80Right-handed alpha
Helix 65
AH2
G
81 113Right-handed alpha
Helix 66
AH3
G
113 118Right-handed alpha
Helix 67
AH4
G
120 142Right-handed alpha
Helix 68
AH5
G
144 169Right-handed alpha
Helix 69
AH6
G
173 190Right-handed alpha
Helix 70
AH7
G
193 211Right-handed alpha
Helix 71
AH8
G
219 239Right-handed alpha
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There are no sheets in PDB entry 8QT5
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