Analysis of interatomic Contacts of Structural Units in PDB entry:
8QT7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QT7 entry

There is 1 chain in PDB entry 8QT7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2LYS 400
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8QT7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 6Right-handed 310
Helix 2
AA2
A
7 29Right-handed alpha
Helix 3
AA3
A
32 48Right-handed alpha
Helix 4
AA4
A
52 59Right-handed alpha
Helix 5
AA5
A
61 88Right-handed alpha
Helix 6
AA6
A
94 116Right-handed alpha
Helix 7
AA7
A
121 130Right-handed alpha
Helix 8
AA8
A
131 147Right-handed alpha
Helix 9
AA9
A
148 152Right-handed 310
Helix 10
AB1
A
155 178Right-handed alpha
Helix 11
AB2
A
178 183Right-handed alpha
Helix 12
AB3
A
253 263Right-handed alpha
Helix 13
AB4
A
279 283Right-handed 310
Helix 14
AB5
A
296 306Right-handed alpha
Helix 15
AB6
A
321 325Right-handed 310
Helix 16
AB7
A
327 338Right-handed alpha
Helix 17
AB8
A
372 387Right-handed alpha
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There are 2 sheets in PDB entry 8QT7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 195first strand
Strand 2
A
200 211anti-parallel
Strand 3
A
242 250anti-parallel
Strand 4
A
233 239anti-parallel
Strand 5
A
218 224anti-parallel
Strand 6
A
268 275anti-parallel
Strand 7
A
186 195anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 347first strand
Strand 2
A
312 319parallel
Strand 3
A
286 292parallel
Strand 4
A
365 370parallel
Strand 5
A
391 394parallel
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