Analysis of interatomic Contacts of Structural Units in PDB entry:
8QTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8QTC entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 8QTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ASP 240
C
 SER 1171ASN 1172
C
 ALA 1174PRO 1175
B
 SER 3THR 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8QTC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 19Right-handed alpha
Helix 2
AA2
A
20 35Right-handed alpha
Helix 3
AA3
A
41 76Right-handed alpha
Helix 4
AA4
A
78 110Right-handed alpha
Helix 5
AA5
A
110 115Right-handed alpha
Helix 6
AA6
A
118 139Right-handed alpha
Helix 7
AA7
A
140 166Right-handed alpha
Helix 8
AA8
A
170 187Right-handed alpha
Helix 9
AA9
A
190 208Right-handed alpha
Helix 10
AB1
A
213 238Right-handed alpha
Helix 11
AB2
B
4 18Right-handed alpha
Helix 12
AB3
B
20 35Right-handed alpha
Helix 13
AB4
B
41 76Right-handed alpha
Helix 14
AB5
B
78 110Right-handed alpha
Helix 15
AB6
B
110 115Right-handed alpha
Helix 16
AB7
B
117 139Right-handed alpha
Helix 17
AB8
B
140 166Right-handed alpha
Helix 18
AB9
B
170 187Right-handed alpha
Helix 19
AC1
B
190 208Right-handed alpha
Helix 20
AC2
B
216 235Right-handed alpha
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There are no sheets in PDB entry 8QTC
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